RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 IGFBP4P22692 258 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ACP1P24666 158 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ARL4DP49703 201 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 MRPL23Q16540 153 aaKnown RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 MS4A13Q5J8X5 152 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 SLC23A3Q6PIS1 610 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 RNF152Q8N8N0 203 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 OR4N2Q8NGD1 307 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ACER1Q8TDN7 264 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 TMEM37Q8WXS4 190 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 NMNAT2Q9BZQ4 307 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 FLRT3Q9NZU0 649 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CCL22O00626 93 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 MLNRO43193 412 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 XRCC2O43543 280 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 WNT2P09544 360 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CTSEP14091 401 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 LHX8Q68G74 356 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 PSMF1Q92530 271 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 MYADMQ96S97 322 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ABHD6Q9BV23 337 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 MAP1LC3CQ9BXW4 147 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 OR51I1Q9H343 314 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CKAP5Q14008 2032 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PAPPA2Q9BXP8 1791 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ANKRD30BLA7E2S9 258 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 VWC2LB2RUY7 222 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TMEM50AO95807 157 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 FAM3BP58499 235 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 SIRPAP78324 504 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 IAH1Q2TAA2 248 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 POM121L1PQ3SYA9 428 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ZNF385BQ569K4 471 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TMEM25Q86YD3 366 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 ZNF676Q8N7Q3 588 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ZNF615Q8N8J6 731 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 SLC25A40Q8TBP6 338 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 AQP3Q92482 292 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TM4SF19Q96DZ7 209 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 SDF2Q99470 211 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 LINC00597Q9H2U6 94 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 MBNL3Q9NUK0 354 aaKnown RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 TP53TG3Q9ULZ0 132 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 V9GY05 133 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 MCM3APO60318 1980 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TSPAN11A1L157 253 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PSMB11A5LHX3 300 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PRR19A6NJB7 356 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 C21orf140B9A014 251 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 CSN2P05814 226 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 CELA2BP08218 269 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 EDN2P20800 178 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 NTSP30990 170 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TIA1P31483 386 aaKnown RBP eCLIP4.52□□□□□ -1.696e-6■■□□□ 11.4
HERC4-205ENST00000412272 PBX2P40425 430 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 RPL8P62917 257 aaKnown RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 HLA-DRB3P79483 266 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PLP2Q04941 152 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ELAVL3Q14576 367 aaKnown RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 CST9LP1Q5W188 147 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 GLIPR1L1Q6UWM5 242 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ARHGEF39Q8N4T4 335 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TMEM251Q8N6I4 163 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TMEM99Q8N816 258 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 FADS6Q8N9I5 356 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 APCDD1LQ8NCL9 501 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 OR4F5Q8NH21 305 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 STARD4Q96DR4 205 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 HSPB9Q9BQS6 159 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 SPON2Q9BUD6 331 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TM2D1Q9BX74 207 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 SMIM3Q9BZL3 60 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PARLQ9H300 379 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 EGLN3Q9H6Z9 239 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PRSS16Q9NQE7 514 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 WSB2Q9NYS7 404 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 A0A087WUU8 490 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 DAPL1A0PJW8 107 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 F5H5K5 113 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 K7EP34 96 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 LATO43561 262 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 CD5LO43866 347 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 JTBO76095 146 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PRSS56P0CW18 603 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ADH5P11766 374 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 B4GALT1P15291 398 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PPP1CCP36873 323 aaKnown RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 UCNP55089 124 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 FUT5Q11128 374 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 NR0B2Q15466 257 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 CCL15Q16663 113 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 ITPRIPL2Q3MIP1 535 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 MPV17L2Q567V2 206 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 TIMM23BQ5SRD1 257 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 STPG1Q5TH74 334 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms