RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 TAS2R20P59543 309 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 PAX5Q02548 391 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 TMEM69Q5SWH9 247 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 CIARTQ8N365 385 aaPredicted RBP13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 TPRX1Q8N7U7 411 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 H1FXQ92522 213 aaKnown RBP13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 C1orf159Q96HA4 380 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ETAA1Q9NY74 926 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
AP001056.1-201ENST00000411956 ARID1AO14497 2285 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 TRAV18A0A075B6X5 111 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 C22orf46C9J442 243 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 GPR37O15354 613 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 FOXH1O75593 365 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 ZFP36P26651 326 aaKnown RBP13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 ERP29P30040 261 aaKnown RBP13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 P2RX3P56373 397 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 AESQ08117 197 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 MADCAM1Q13477 382 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 ARL6IP1Q15041 203 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 KRBOX4Q5JUW0 171 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 CNIH2Q6PI25 160 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 OR6Q1Q8NGQ2 317 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 DCTN5Q9BTE1 182 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 AK3Q9UIJ7 227 aa13.05□□□□□ -0.32
AP001056.1-201ENST00000411956 TMEM30CPA0ZSE6 113 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 SERPINE3A8MV23 424 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 GSTP1P09211 210 aaKnown RBP13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 TNFSF8P32971 234 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 S100A5P33763 92 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 TALDO1P37837 337 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 MNDAP41218 407 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 GLIPR1P48060 266 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 LCN2P80188 198 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 TMEM249Q2WGJ8 235 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 CDNFQ49AH0 187 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 ZNF497Q6ZNH5 498 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 TCF23Q7RTU1 214 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 GAPTQ8N292 157 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 DIRAS2Q96HU8 199 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 COX4I2Q96KJ9 171 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 HDHD3Q9BSH5 251 aaPredicted RBP13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 LPAR2Q9HBW0 351 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 KIF25Q9UIL4 384 aa13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 RPUSD1Q9UJJ7 312 aaKnown RBP13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 ELF5Q9UKW6 265 aaPredicted RBP13.04□□□□□ -0.32
AP001056.1-201ENST00000411956 CR1P17927 2039 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 TRBV23-1A0A0A0MS06 115 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 ODAMA1E959 279 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 CA11O75493 328 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 IGHV4-31P0DP07 118 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 PTHLHP12272 177 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 RPL31P62899 125 aaKnown RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 C8orf46Q8TAG6 207 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 MRPL30Q8TCC3 161 aaKnown RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 CMSS1Q9BQ75 279 aaKnown RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 AUNIPQ9H7T9 357 aa13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 POLR3KQ9Y2Y1 108 aaPredicted RBP13.03□□□□□ -0.32
AP001056.1-201ENST00000411956 LOC105371242A0A075B767 164 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 MEIKINA0A087WXM9 373 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 B4DSR2 109 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 HLA-DQB1P01920 261 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 MSMBP08118 114 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 CD3GP09693 182 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 PAX2Q02962 417 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 ARFRP1Q13795 201 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 ZNF273Q14593 569 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 PNLIPRP3Q17RR3 467 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 CD276Q5ZPR3 534 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 BAIAP2L2Q6UXY1 529 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 SPNS3Q6ZMD2 512 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 Q6ZPA2 131 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 CCDC190Q86UF4 302 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 LINC01356Q8N9X3 169 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 LY6G5BQ8NDX9 201 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 OR4K15Q8NH41 348 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 NUDCD2Q8WVJ2 157 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 GCDHQ92947 438 aaPredicted RBP13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 NCOR1P1Q9H4R4 102 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 C12orf4Q9NQ89 552 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
AP001056.1-201ENST00000411956 IGHV2-70DA0A0C4DH43 119 aa13.01□□□□□ -0.33
AP001056.1-201ENST00000411956 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms