RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ODAMA1E959 279 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A10PA6NDY2 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A18PA6NE21 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A16PA6NEW6 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A20PA6NIJ5 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A8PA6NJQ4 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A7PA6NKC0 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A22PA8MWA6 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A12PA8MX19 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A5PA8MXJ8 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A23PA8MXZ1 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 BPNT1O95861 308 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 RBP4P02753 201 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A15PP0C7V4 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A13PP0C7W8 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A14PP0C7W9 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 FAM90A24PP0C7X0 464 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 SMIM18P0DKX4 95 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 GADD45AP24522 165 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 KCNJ3P48549 501 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 OR10A3P58181 314 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 SRSF2Q01130 221 aaKnown RBP18.28■□□□□ 0.52
PTCD3-203ENST00000409783 KRBOX4Q5JUW0 171 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 RSBN1Q5VWQ0 802 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-203ENST00000409783 CYYR1Q96J86 154 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 CST11Q9H112 138 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 PRDM13Q9H4Q3 707 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 NCOR1P1Q9H4R4 102 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 PLGRKTQ9HBL7 147 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 SSR3Q9UNL2 185 aa18.28■□□□□ 0.52
PTCD3-203ENST00000409783 UBE2J1Q9Y385 318 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-203ENST00000409783 A0A0A6YYJ9 748 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 FUOMA2VDF0 154 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 TCF21O43680 179 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 VENTXO95231 258 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 MPIG6BO95866 241 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 MYL9P24844 172 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 CFPP27918 469 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 PSMD7P51665 324 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 HILS1P60008 231 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 P2RY14Q15391 338 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 NCR3LG1Q68D85 454 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 SIGLECL1Q8N7X8 197 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 KCNG3Q8TAE7 436 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 ZNF418Q8TF45 676 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-203ENST00000409783 SUCNR1Q9BXA5 334 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 ING3Q9NXR8 418 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 KIF25Q9UIL4 384 aa18.27■□□□□ 0.52
PTCD3-203ENST00000409783 FBN1P35555 2871 aaKnown RBP18.27■□□□□ 0.51
PTCD3-203ENST00000409783 PDCD5O14737 125 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 CGB3P0DN86 165 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 CGB7P0DN87 165 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 UBE2E1P51965 193 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 CLDN12P56749 244 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 RPS27AP62979 156 aaKnown RBP18.26■□□□□ 0.51
PTCD3-203ENST00000409783 GUCA2AQ02747 115 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 RAB11BQ15907 218 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 DEFB112Q30KQ8 113 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 ATAD3CQ5T2N8 411 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 BRICD5Q6PL45 260 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 PNKDQ8N490 385 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 YIPF6Q96EC8 236 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 CHCHD6Q9BRQ6 235 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 TM2D1Q9BX74 207 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 RNF167Q9H6Y7 350 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 ESM1Q9NQ30 184 aa18.26■□□□□ 0.51
PTCD3-203ENST00000409783 MDFIC2A0A1B0GVS7 189 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 hCG_1809904A0A1W2PP81 198 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 A0A1W2PPE2 198 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 A0A1W2PR64 198 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 A0A1W2PRV1 198 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 LDLRAD4O15165 306 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 MMP23AO75900 390 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 IGHV1-8P0DP01 117 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 RAB3BP20337 219 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 HES5Q5TA89 166 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 ZNF782Q6ZMW2 699 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-203ENST00000409783 OR2W3Q7Z3T1 314 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 OR51D1Q8NGF3 324 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 TMEM59Q9BXS4 323 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 BARHL1Q9BZE3 327 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 SPACA1Q9HBV2 294 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 VCX3AQ9NNX9 186 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 TAS2R3Q9NYW6 316 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 FBLN5Q9UBX5 448 aa18.25■□□□□ 0.51
PTCD3-203ENST00000409783 TRGV10A0A0A0MS01 117 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 A0A0A6YYD4 124 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 IFITM5A6NNB3 132 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 NPFFO15130 113 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 ARSBP15848 533 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 C17orf58Q2M2W7 97 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 SLC35E4Q6ICL7 350 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 RAB12Q6IQ22 244 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 TRAPPC6BQ86SZ2 158 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 ZDHHC22Q8N966 263 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 OR13A1Q8NGR1 328 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 FAM3DQ96BQ1 224 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 AJUBAQ96IF1 538 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 NICN1Q9BSH3 213 aa18.24■□□□□ 0.51
PTCD3-203ENST00000409783 CENPOQ9BU64 300 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms