RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IGLV3-1P01715 115 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 HLA-HP01893 362 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 PRB1P04280 392 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 KRT8P05787 483 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ZNF14P17017 642 aaPredicted RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 ZNF19P17023 458 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 PSMB9P28065 219 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 GUCA1AP43080 201 aaPredicted RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 KIR3DL2P43630 455 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 UQCRFS1P47985 274 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 RGS6P49758 472 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 RIDAP52758 137 aaKnown RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 TAS2R43P59537 309 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLK1-203ENST00000409769 GRB2P62993 217 aaKnown RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 TGFBR3Q03167 851 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 MFGE8Q08431 387 aaPredicted RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 RAB35Q15286 201 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 TSC22D1Q15714 1073 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 IGFBP7Q16270 282 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SLC25A35Q3KQZ1 300 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SLC36A2Q495M3 483 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 HIKESHIQ53FT3 197 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ARMCX4Q5H9R4 360 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 C1QTNF12Q5T7M4 302 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 LIPNQ5VXI9 398 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ZNF774Q6NX45 483 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 RPL22L1Q6P5R6 122 aaKnown RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 CD200R1LQ6Q8B3 271 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 STAC2Q6ZMT1 411 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 Q6ZSR3 168 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 BHLHA15Q7RTS1 189 aaPredicted RBP3.36□□□□□ -1.87
CLK1-203ENST00000409769 SLC16A14Q7RTX9 510 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 KRT77Q7Z794 578 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 CCDC36Q8IYA8 594 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 UBE2J2Q8N2K1 259 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 OR2G2Q8NGZ5 317 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 OR1F12Q8NHA8 337 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SMIM19Q96E16 107 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 DOK1Q99704 481 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ATG101Q9BSB4 218 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 HDHD2Q9H0R4 259 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 HEXA-AS1Q9H8Q6 139 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ELOVL3Q9HB03 270 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 VCX3AQ9NNX9 186 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SLC17A5Q9NRA2 495 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 NDUFB11Q9NX14 153 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 FAM206AQ9NX38 181 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ENPP5Q9UJA9 477 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SH3BGRL2Q9UJC5 107 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 GNG8Q9UK08 70 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 IKZF2Q9UKS7 526 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 FBXL3Q9UKT7 428 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 POLR1DQ9Y2S0 133 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 NSG2Q9Y328 171 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 TIMM10BQ9Y5J6 103 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 SLC25A15Q9Y619 301 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 R4GMQ9 66 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 ROS1P08922 2347 aa3.36□□□□□ -1.87
CLK1-203ENST00000409769 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ANKHD1Q8IWZ3 2542 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 A0A1B0GUH1 482 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TRDV1A0A1B0GX56 115 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CIB4A0PJX0 185 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 C5orf63A6NC05 138 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 OR5H1A6NKK0 313 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 H3BSA7 217 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 M0R135 149 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CCRL2O00421 344 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 GPX5O75715 221 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TTRP02766 147 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 SERPINA5P05154 406 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TACSTD2P09758 323 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 H2BFMP0C1H6 154 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ACSM4P0C7M7 580 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 HSMCR30P0CW71 290 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CBR1P16152 277 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CD36P16671 472 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CELP19835 753 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CCL1P22362 96 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 GALP22466 123 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 PAX7P23759 505 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 FCGR2BP31994 310 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 FCGR2CP31995 323 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 UGT2B10P36537 528 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ARR3P36575 388 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CRYBB2P43320 205 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CX3CR1P49238 355 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 GBX2P52951 348 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 TMBIM6P55061 237 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF121P58317 390 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 PCBD1P61457 104 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 RPS25P62851 125 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 TFF3Q07654 80 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ECH1Q13011 328 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 GSG1Q2KHT4 349 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF829Q3KNS6 432 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms