RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CDK5R1Q15078 307 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 LTC4SQ16873 150 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KRBOX4Q5JUW0 171 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SPIN3Q5JUX0 258 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HAPLN4Q86UW8 402 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PRSS35Q8N3Z0 413 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TMEM104Q8NE00 496 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RFESDQ8TAC1 157 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DLX4Q92988 240 aaPredicted RBP9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KCTD7Q96MP8 289 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OSBPL10Q9BXB5 764 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ALX4Q9H161 411 aaPredicted RBP9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MAGIXQ9H6Y5 334 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 LINC00574Q9H8X3 128 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SLC25A19Q9HC21 320 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 EXOSC4Q9NPD3 245 aaKnown RBP9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ARL8BQ9NVJ2 186 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 C19orf73Q9NVV2 129 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TVP23BQ9NYZ1 205 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KIAA1456Q9P272 454 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IGHV1-3A0A0C4DH29 117 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MAGEA13PA6NCF6 341 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SH2D1BO14796 132 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PRKYO43930 277 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CSN2P05814 226 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IGHV4-30-4P0DP06 118 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PPIFP30405 207 aaKnown RBP9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KIR3DL2P43630 455 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 F2RL1P55085 397 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SCN1BQ07699 218 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MADCAM1Q13477 382 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SLC35F2Q8IXU6 374 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 Q8IYB0 196 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DEFB107AQ8IZN7 70 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR8H3Q8N146 312 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF491Q8N8L2 437 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ISOC1Q96CN7 298 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SPACA5Q96QH8 159 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CNN2Q99439 309 aaKnown RBP9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 LIN7CQ9NUP9 197 aaKnown RBP9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IDI2-AS1Q9NZ38 188 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF581Q9P0T4 197 aa9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SIRT4Q9Y6E7 314 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1P3-201ENST00000403408 NPIPB11E5RHQ5 1161 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 G3V318 75 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 LDLRAD4O15165 306 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SYT7O43581 403 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KDM4BO94953 1096 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF44P15621 663 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RBP2P50120 134 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RAB7AP51149 207 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SLURP1P55000 103 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MTCP1P56278 107 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 EFNB1P98172 346 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RUNX1Q01196 453 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF816Q0VGE8 651 aaPredicted RBP9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SRSF7Q16629 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 FAM27D1Q5T7N8 215 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 AADACL4Q5VUY2 407 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF429Q86V71 674 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IZUMO1Q8IYV9 350 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 FAM71E2Q8N5Q1 922 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DNAAF1Q8NEP3 725 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR5D18Q8NGL1 313 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PLPPR1Q8TBJ4 325 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HRASLS5Q96KN8 279 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 S1PR3Q99500 378 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MNTQ99583 582 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ELAC2Q9BQ52 826 aaKnown RBP9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 KIF25Q9UIL4 384 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TMEM14AQ9Y6G1 99 aa9.18□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TRAV24A0A0B4J272 114 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 LOC107986453A0A1B0GWG9 222 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HSPB6O14558 160 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OVOL1O14753 267 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HSD17B6O14756 317 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GATBO75879 557 aaKnown RBP9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IL1AP01583 271 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IGF1P05019 195 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HTR1FP30939 366 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SSTR5P35346 364 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 VHLP40337 213 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GLP1RP43220 463 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ATP1B3P54709 279 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ADGRG5Q8IZF4 528 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR51T1Q8NGJ9 327 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ST6GALNAC6Q969X2 333 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TBX5Q99593 518 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PLEKHA1Q9HB21 404 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CLN6Q9NWW5 311 aa9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GLS2Q9UI32 602 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms