RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 M0R1W7 72 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 LDLRAD4O15165 306 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FAM157CP0CG43 387 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 CFPP27918 469 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 BLMHQ13867 455 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 GPR107Q5VW38 600 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RAB12Q6IQ22 244 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 C1orf122Q6ZSJ8 110 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 GPR141Q7Z602 305 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 LHX4Q969G2 390 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 BARHL1Q9BZE3 327 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 LPAR5Q9H1C0 372 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 LIN7BQ9HAP6 207 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 DAPK2Q9UIK4 370 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 PEX16Q9Y5Y5 336 aa14.11□□□□□ -0.15
PTCHD3P3-201ENST00000403073 A0A0A6YYD4 124 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TRAV40A0A0B4J280 105 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 ODAMA1E959 279 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FUOMA2VDF0 154 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 MCRIP1C9JLW8 97 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FUT3P21217 361 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RPS19P39019 145 aaKnown RBP14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 EFNB2P52799 333 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 DLX6P56179 175 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 NCS1P62166 190 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RSBN1Q5VWQ0 802 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 SFXN4Q6P4A7 337 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 SLC16A12Q6ZSM3 486 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TRAPPC6BQ86SZ2 158 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 NEK7Q8TDX7 302 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TM2D1Q9BX74 207 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 SPACA1Q9HBV2 294 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FBLN5Q9UBX5 448 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 KIF25Q9UIL4 384 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 NUP50Q9UKX7 468 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 SOX21Q9Y651 276 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 LINC00312Q9Y6C7 94 aa14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 FN1P02751 2386 aaKnown RBP14.1□□□□□ -0.15
PTCHD3P3-201ENST00000403073 MEIKINA0A087WXM9 373 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TRAV39A0A0B4J263 110 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 CENPVL3A0A0U1RRI6 287 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 UBE2QL1A1L167 161 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 ZNF728P0DKX0 622 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RANBP1P43487 201 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 KCNJ3P48549 501 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 VBP1P61758 197 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 NKAPLQ5M9Q1 402 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 ANKRD13BQ86YJ7 626 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 C22orf15Q8WYQ4 148 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TNFRSF14Q92956 283 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 POM121Q96HA1 1249 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 ZNF714Q96N38 554 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 URM1Q9BTM9 101 aaKnown RBP14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 METTL8Q9H825 291 aaKnown RBP14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 ZNF69Q9UC07 566 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 RAB22AQ9UL26 194 aa14.09□□□□□ -0.15
PTCHD3P3-201ENST00000403073 NSD1Q96L73 2696 aaPredicted RBP14.08□□□□□ -0.15
PTCHD3P3-201ENST00000403073 TRGV10A0A0A0MS01 117 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 C17orf98A8MV24 154 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 SOCS1O15524 211 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 PDCD6O75340 191 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 SNRPBP14678 240 aaKnown RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 EPHA1P21709 976 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 PRTN3P24158 256 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 BLVRBP30043 206 aaPredicted RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 RPL5P46777 297 aaKnown RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 VEGFCP49767 419 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 KLRD1Q13241 179 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 RBM39Q14498 530 aaKnown RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 IDNKQ5T6J7 187 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 RUSC1-AS1Q66K80 236 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 SLC35E4Q6ICL7 350 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 RTN4RL2Q86UN3 420 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 BCL6BQ8N143 479 aaPredicted RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 FAM89BQ8N5H3 189 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 DYRK2Q92630 601 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 CORO2AQ92828 525 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 NEDD4LQ96PU5 975 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 FAAP24Q9BTP7 215 aa14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 UBE2J1Q9Y385 318 aaPredicted RBP14.08□□□□□ -0.16
PTCHD3P3-201ENST00000403073 hCG_1809904A0A1W2PP81 198 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PPE2 198 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PR64 198 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PRD5 423 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PRF3 423 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PRM7 423 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 A0A1W2PRV1 198 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 TMEM30CPA0ZSE6 113 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 RNASEK-C17orf49H0YIS7 233 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 H3BUI4 141 aa14.07□□□□□ -0.16
PTCHD3P3-201ENST00000403073 CHATP28329 748 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms