RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 C10orf128Q5T292 105 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 SHEQ5VZ18 495 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 ERRFI1Q9UJM3 462 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 LOXL2Q9Y4K0 774 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 LIPGQ9Y5X9 500 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 KPTNQ9Y664 436 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 GPR137BO60478 399 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 MAGEA5P43359 124 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 DUSP3P51452 185 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 ZXDAP98168 799 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 EWSR1Q01844 656 aaKnown RBP eCLIP10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 KCNMB1Q16558 191 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF674Q2M3X9 581 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 CRIM1Q9NZV1 1036 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 SEMA5BQ9P283 1151 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 C10orf142B7Z368 130 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 MSTNO14793 375 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 CHST1O43916 411 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 TUSC2O75896 110 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 GRPP07492 148 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 H2AFB1P0C5Y9 115 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 SRD5A2P31213 254 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 CCL20P78556 96 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 C4orf17Q53FE4 359 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 TMEM100Q9NV29 134 aa10.93□□□□□ -0.66
PPP4R1-202ENST00000400555 TUBG1P23258 451 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 ATP6V0CP27449 155 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 TAGLN2P37802 199 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 DYNLT3P51808 116 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 FGF8P55075 233 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 UBE2KP61086 200 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 HIKESHIQ53FT3 197 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 TMEM105Q8N8V8 129 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 SMIM8Q96KF7 97 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 TM2D1Q9BX74 207 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 GNG13Q9P2W3 67 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 GTF3C1Q12789 2109 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 RBM11P57052 281 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 DHRS7BQ6IAN0 325 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 CRIP3Q6Q6R5 217 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 IL22RA1Q8N6P7 574 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 CT55Q8WUE5 264 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 PILRBQ9UKJ0 227 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 ADAMTS9Q9P2N4 1935 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 IGLV3-32A0A0A0MS00 114 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 OR2C1O95371 312 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 S100GP29377 79 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 PMS2CLQ68D20 193 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 OR8G2PQ6IF36 304 aa10.92□□□□□ -0.66
PPP4R1-202ENST00000400555 PKDREJQ9NTG1 2253 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 CST2P09228 141 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 FGF5P12034 268 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 PTAFRP25105 342 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 NDUFA6P56556 154 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF818PQ6ZRF7 136 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 NUDT16L1Q9BRJ7 211 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 PARP11Q9NR21 331 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 FOXD3Q9UJU5 478 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 USF3Q68DE3 2245 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ARPC4-TTLL3A0A0A6YYG9 625 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 IGKV1D-13A0A0B4J2D9 117 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 A0A1W2PPE3 182 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 IGKV1-13P0DP09 117 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 MDKP21741 143 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 BTNL8Q6UX41 500 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 GCNT2Q8N0V5 402 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF808Q8N4W9 903 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 INTS12Q96CB8 462 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 USB1Q9BQ65 265 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ZNF552Q9H707 407 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 TRAPPC2LQ9UL33 140 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ANKRD30BLA7E2S9 258 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ECI1P42126 302 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 MEOX2P50222 304 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 RAB11AP62491 216 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 RPL23AP62750 156 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 Q0VFX4 171 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 C6orf15Q6UXA7 325 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 FANCFQ9NPI8 374 aa10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-202ENST00000400555 ARGFXA6NJG6 315 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 METTL15P1P0C7V9 234 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 HOXA4Q00056 320 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 TIPARPQ7Z3E1 657 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 WDR5BQ86VZ2 330 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 ZDHHC23Q8IYP9 409 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SCGB1C1Q8TD33 95 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 WDR54Q9H977 334 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 IFNA5P01569 189 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 IGHV3-13P01766 116 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 IGHV3-7P01780 117 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 SULT1A1P50225 295 aa10.9□□□□□ -0.66
PPP4R1-202ENST00000400555 IDH3GP51553 393 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms