RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 OR11H7Q8NGC8 314 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 OR10G4Q8NGN3 311 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 OR10G9Q8NGN4 311 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 OR10G7Q8NGN6 311 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 TO15178 435 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 CDC34P49427 236 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 RNF212Q495C1 297 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 MRPL24Q96A35 216 aaKnown RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 SLC35B3Q9H1N7 401 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ZFC3H1O60293 1989 aaKnown RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 SPP1P10451 314 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 VDAC1P21796 283 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 IL24Q13007 206 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ANGPTL6Q8NI99 470 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ZNRF4Q8WWF5 429 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 FAM122AQ96E09 287 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 DOK5Q9P104 306 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 SLC45A2Q9UMX9 530 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 CHST1O43916 411 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ZNF737O75373 536 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 FNDC7Q5VTL7 733 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 INO80CQ6PI98 192 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ADAD2Q8NCV1 583 aaKnown RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 SEBOXQ9HB31 216 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 OPN4Q9UHM6 478 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ZNF107Q9UII5 783 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 AHCTF1Q8WYP5 2266 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 FAM27BQ5VT28 67 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 TIPARPQ7Z3E1 657 aaKnown RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 BCL2L2Q92843 193 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ADTRPQ96IZ2 230 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 NXF2Q9GZY0 626 aaKnown RBP15.91■□□□□ 0.14
COL18A1-204ENST00000400337 MMP24Q9Y5R2 645 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 ARL2-SNX15V9GYD0 113 aa15.91■□□□□ 0.14
COL18A1-204ENST00000400337 RNF7Q9UBF6 113 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 FAM157AC9JC47 383 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 FAM162BQ5T6X4 162 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 HDHD3Q9BSH5 251 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-204ENST00000400337 OR2J1Q9GZK6 312 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 CSRP3P50461 194 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 AMMECR1Q9Y4X0 333 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-204ENST00000400337 SLC25A5P05141 298 aaKnown RBP15.9■□□□□ 0.14
COL18A1-204ENST00000400337 PAX5Q02548 391 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 OR4F17Q8NGA8 305 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 KCNE5Q9UJ90 142 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 BRWD3Q6RI45 1802 aa15.9■□□□□ 0.14
COL18A1-204ENST00000400337 GZMHP20718 246 aa15.89■□□□□ 0.14
COL18A1-204ENST00000400337 CEACAM3P40198 252 aa15.89■□□□□ 0.14
COL18A1-204ENST00000400337 RHOBP62745 196 aa15.89■□□□□ 0.14
COL18A1-204ENST00000400337 TMEM241Q24JQ0 296 aa15.89■□□□□ 0.14
COL18A1-204ENST00000400337 SLC24A4Q8NFF2 622 aa15.89■□□□□ 0.14
COL18A1-204ENST00000400337 OR5H1A6NKK0 313 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 P2RY1P47900 373 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 ATP6V1FQ16864 119 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 BLNKQ8WV28 456 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 HSD17B10Q99714 261 aaKnown RBP15.89■□□□□ 0.13
COL18A1-204ENST00000400337 ZNF426Q9BUY5 554 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 STARD6P59095 220 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 TNXAQ16473 311 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 POMT1Q9Y6A1 747 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 RAB5AP20339 215 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 KRTDAPP60985 99 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 FAM219AQ8IW50 185 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 SAP25Q8TEE9 199 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 ANGPTL4Q9BY76 406 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 LRRC3CA6NJW4 275 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 FCER1GP30273 86 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 CD200P41217 278 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 HLA-DRB3P79483 266 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 PSG4Q00888 419 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 AMELYQ99218 206 aa15.89■□□□□ 0.13
COL18A1-204ENST00000400337 ANKRD34CP0C6C1 535 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 LYZL2Q7Z4W2 148 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 TMEM251Q8N6I4 163 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 PRR7Q8TB68 274 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 ZNF488Q96MN9 340 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 FGF5P12034 268 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 MYPOPQ86VE0 399 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-204ENST00000400337 RNF24Q9Y225 148 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 SUMO1P63165 101 aaKnown RBP15.88■□□□□ 0.13
COL18A1-204ENST00000400337 ZNF154Q13106 437 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 OR2W1Q9Y3N9 320 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 TRAPPC1Q9Y5R8 145 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 MYO16Q9Y6X6 1858 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 SPINK4O60575 86 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 SMIM10L1P0DMW3 83 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 S100A4P26447 101 aaKnown RBP15.88■□□□□ 0.13
COL18A1-204ENST00000400337 IFITM3Q01628 133 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 TMEM37Q8WXS4 190 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 SMIM10Q96HG1 83 aa15.88■□□□□ 0.13
COL18A1-204ENST00000400337 RPL36A-HNRNPH2H7BZ11 118 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 CLDN34H7C241 214 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 CDX4O14627 284 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ORM2P19652 201 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 STPG1Q5TH74 334 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 OR4D10Q8NGI6 311 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 MRGPRFQ96AM1 343 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 KLK13Q9UKR3 277 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ZNF66Q6ZN08 573 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 C9orf62Q8N4C0 152 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms