RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
PRAME-202ENST00000398743 C5orf24Q7Z6I8 188 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 PIP4P1Q86T03 277 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 FAM58AQ8N1B3 248 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 OR4A4PQ8NGN8 299 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 ERGIC1Q969X5 290 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 HS3ST1O14792 307 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 GPR137BO60478 399 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 FBXO24O75426 580 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 MED6O75586 246 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 TUSC2O75896 110 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 SLC34A2O95436 690 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 GLAP06280 429 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 ATF4P18848 351 aaPredicted RBP11.82□□□□□ -0.52
PRAME-202ENST00000398743 SPINK2P20155 84 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 TGFBR3Q03167 851 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 VASH2Q86V25 355 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 MRPL30Q8TCC3 161 aaKnown RBP11.82□□□□□ -0.52
PRAME-202ENST00000398743 NKX6-2Q9C056 277 aaPredicted RBP11.82□□□□□ -0.52
PRAME-202ENST00000398743 OR51I2Q9H344 312 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 GLRX2Q9NS18 164 aa11.82□□□□□ -0.52
PRAME-202ENST00000398743 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
PRAME-202ENST00000398743 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 NKX2-8O15522 239 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 CDS2O95674 445 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 ZNF14P17017 642 aaPredicted RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 P2RY1P47900 373 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 NOVA1P51513 510 aaKnown RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 UBE2NP61088 152 aaKnown RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 ZNF695Q8IW36 515 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 GAPTQ8N292 157 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 SVBPQ8N300 66 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 OR4D5Q8NGN0 318 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 TMEM56-RWDD3S4R434 201 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 IGKV1-6A0A0C4DH72 117 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 J3QT63 122 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 LPAR6P43657 344 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 CCL11P51671 97 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 BLOC1S1P78537 153 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 SRSF3P84103 164 aaKnown RBP11.81□□□□□ -0.52
PRAME-202ENST00000398743 GNMTQ14749 295 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 RDH5Q92781 318 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 RTL8AQ9BWD3 113 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 RHOFQ9HBH0 211 aa11.81□□□□□ -0.52
PRAME-202ENST00000398743 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 F8W036 122 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 SMPD2O60906 423 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 RHBDL1O75783 438 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 IGHG3P01860 377 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 CELA3BP08861 270 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 FTH1P19P0C7X4 201 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 ADCYAP1P18509 176 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 C20orf204Q6ZNR8 217 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 MYPOPQ86VE0 399 aaPredicted RBP11.8□□□□□ -0.52
PRAME-202ENST00000398743 CMTM1Q8IZ96 169 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 GCNT2Q8N0V5 402 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 SUMF1Q8NBK3 374 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 DEFB124Q8NES8 71 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 FDCSPQ8NFU4 85 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 SPIN2AQ99865 258 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 SPIN2BQ9BPZ2 258 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 USB1Q9BQ65 265 aaKnown RBP11.8□□□□□ -0.52
PRAME-202ENST00000398743 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 CDH20Q9HBT6 801 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 TREM1Q9NP99 234 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 CLCF1Q9UBD9 225 aa11.8□□□□□ -0.52
PRAME-202ENST00000398743 RCL1Q9Y2P8 373 aaKnown RBP11.8□□□□□ -0.52
PRAME-202ENST00000398743 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 DNASE2O00115 360 aaPredicted RBP11.79□□□□□ -0.52
PRAME-202ENST00000398743 HSD17B6O14756 317 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
PRAME-202ENST00000398743 ZNF44P15621 663 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 IGHV1-2P23083 117 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 IDH3GP51553 393 aaPredicted RBP11.79□□□□□ -0.52
PRAME-202ENST00000398743 CAV2P51636 162 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 PPP1CBP62140 327 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 OR2J1Q9GZK6 312 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 DNAJC13O75165 2243 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 KNTC1P50748 2209 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
PRAME-202ENST00000398743 A0A1W2PR80 420 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms