RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAM27D1Q5T7N8 215 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 TEX38Q6PEX7 206 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 FAM159AQ6UWV7 190 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 TMUB2Q71RG4 321 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 C16orf52Q8NHV5 167 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 GPR119Q8TDV5 335 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 SMIM4Q8WVI0 70 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ABHD14AQ9BUJ0 271 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 FXYD6Q9H0Q3 95 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 MRPL16Q9NX20 251 aaKnown RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 DOK5Q9P104 306 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 RPS6KB2Q9UBS0 482 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 SIRT4Q9Y6E7 314 aaPredicted RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 GAPDHP04406 335 aaKnown RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 SNRPBP14678 240 aaKnown RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 PSMB1P20618 241 aaKnown RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 CD40P25942 277 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 TFPI2P48307 235 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ATP1B3P54709 279 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 OR12D2P58182 307 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 EIF2B1Q14232 305 aaKnown RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 SLC25A35Q3KQZ1 300 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 TCEAL5Q5H9L2 206 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 TMEM244Q5VVB8 128 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 PLPP4Q5VZY2 271 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF474Q6S9Z5 364 aaPredicted RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 DOK3Q7L591 496 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF676Q8N7Q3 588 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 C8orf44Q96CB5 159 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 MACROD1Q9BQ69 325 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 MIEN1Q9BRT3 115 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 DLL4Q9NR61 685 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF107Q9UII5 783 aaPredicted RBP5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 ERG28Q9UKR5 140 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 CES1P1Q9UKY3 287 aa5.74□□□□□ -1.49
TM9SF4-202ENST00000398022 CACNA1HO95180 2353 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NBPF19A0A087WUL8 3843 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CENPVL1A0A0U1RR11 272 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CENPVL3A0A0U1RRI6 287 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SLC22A20A6NK97 555 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF724A8MTY0 619 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF593O00488 134 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 DEGS1O15121 323 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NDUFB8O95169 186 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SMIM17P0DL12 118 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 FABP4P15090 132 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CXCL3P19876 107 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ALOX5APP20292 161 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 EDNRAP25101 427 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 BTCP35070 178 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 AMTP48728 403 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 RAB38P57729 211 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 UBE2MP61081 183 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 RPS15AP62244 130 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 DMKNQ6E0U4 476 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 RPL22L1Q6P5R6 122 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NR2C2APQ86WQ0 139 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 OR10S1Q8NGN2 331 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 FCAMRQ8WWV6 532 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 S100A16Q96FQ6 103 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 PATZ1Q9HBE1 687 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NUP210Q8TEM1 1887 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZC3H12DA2A288 527 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF705GA8MUZ8 300 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 TNFSF11O14788 317 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ATP1B1P05026 303 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 C8orf88P0DMB2 117 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 HKR1P10072 659 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 RPS27AP62979 156 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ST3GAL2Q16842 350 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 MRPL2Q5T653 305 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 GGNBP1Q5YKI7 109 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 STHQ8IWL8 128 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ARHGEF39Q8N4T4 335 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 OR2T27Q8NH04 317 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SMIM19Q96E16 107 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SDF2Q99470 211 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 PBDC1Q9BVG4 233 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ANKRD10Q9NXR5 420 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NAT8Q9UHE5 227 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 AKAP13Q12802 2813 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 GXYLT2A0PJZ3 443 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 MAP1LC3B2A6NCE7 125 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 HMGB3O15347 200 aaKnown RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CREBL2O60519 120 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ALOX12BO75342 701 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NTN1O95631 604 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 PPP1R3DO95685 299 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ATF1P18846 271 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CHATP28329 748 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 PAFAH1B2P68402 229 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SIRPAP78324 504 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 DUSP2Q05923 314 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SFRP4Q6FHJ7 346 aaPredicted RBP5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ADGRE4PQ86SQ3 457 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 LRRTM1Q86UE6 522 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF433Q8N7K0 673 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms