RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ANGPTL7O43827 346 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SCGNO76038 276 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 NXPH2O95156 264 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FGF5P12034 268 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 IRF2P14316 349 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 GLRA1P23415 457 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CHRNA7P36544 502 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FHITP49789 147 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 MMP16P51512 607 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CCL7P80098 99 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 BATFQ16520 125 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 LPAL2Q16609 132 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CHRFAM7AQ494W8 412 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 RAET1LQ5VY80 246 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CLEC18BQ6UXF7 455 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 HOGA1Q86XE5 327 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SLC22A24Q8N4F4 322 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 C11orf42Q8N5U0 333 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ZNF441Q8N8Z8 693 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 OR51T1Q8NGJ9 327 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FAM213BQ8TBF2 198 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 DYRK2Q92630 601 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 OR10C1Q96KK4 312 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ARV1Q9H2C2 271 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 TCFL5Q9UL49 500 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 DNAJC13O75165 2243 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 A6NIZ1 184 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PATE3B3GLJ2 98 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ZNF878C9JN71 531 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 CBR3O75828 277 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 CFIP05156 583 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 IL6RP08887 468 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 ZNF17P17021 662 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 OR10J1P30954 320 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PPP1CCP36873 323 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 ALDH3B1P43353 468 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RRADP55042 308 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 SNU13P55769 128 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 TMEM50BP56557 158 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 VAMP2P63027 116 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PMS2P11Q13670 270 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 COA6Q5JTJ3 125 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 PHYHD1Q5SRE7 291 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 OGFOD3Q6PK18 319 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 C6orf201Q7Z4U5 140 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 C17orf82Q86X59 251 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 OR4X1Q8NH49 305 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 OIT3Q8WWZ8 545 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 AQP3Q92482 292 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ACY3Q96HD9 319 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PGAM5Q96HS1 289 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RASL10BQ96S79 203 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PRRX2Q99811 253 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 GINS3Q9BRX5 216 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ELOVL1Q9BW60 279 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 TMEM59Q9BXS4 323 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 CDH20Q9HBT6 801 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 FKBP11Q9NYL4 201 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PADI1Q9ULC6 663 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ZNF407Q9C0G0 2248 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 DMXL1Q9Y485 3027 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 DIDO1Q9BTC0 2240 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 TRBV24-1A0A075B6N3 115 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 MEGF11A6BM72 1044 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 SPRY1O43609 319 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 IGHG1P01857 330 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 CHRM2P08172 466 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 SRP19P09132 144 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 SELEP16581 610 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ZNF708P17019 499 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 BLVRBP30043 206 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 OPRM1P35372 400 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 GUCA1AP43080 201 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 OR3A2P47893 321 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 P2RY1P47900 373 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RAB7AP51149 207 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RND2P52198 227 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PTTG1IPP53801 180 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 KLF3P57682 345 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 SELENOTP62341 195 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 HLA-DRB3P79483 266 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RNF151Q2KHN1 245 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 PLPPR5Q32ZL2 321 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 C9orf135Q5VTT2 229 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RHBDD2Q6NTF9 364 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 CPEB2Q7Z5Q1 589 aaKnown RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 ZNF2Q9BSG1 426 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 PHF7Q9BWX1 381 aaPredicted RBP4.37□□□□□ -1.71
SSR1-202ENST00000397511 ANGPTL4Q9BY76 406 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 OR2J1Q9GZK6 312 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 LPAR5Q9H1C0 372 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 RARRES3Q9UL19 164 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 ADAMTS9Q9P2N4 1935 aa4.37□□□□□ -1.71
SSR1-202ENST00000397511 IGKV1-9A0A0C4DH69 117 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FAM230AA0A1W2PPH8 454 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 DEDDO75618 318 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms