RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 A0A087WWC5 75 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 SSSCA1O60232 199 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 CST7O76096 145 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 NXPH3O95157 252 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 CD33P20138 364 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 WNT5AP41221 380 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 PAX5Q02548 391 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 COL10A1Q03692 680 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ADPRHL1Q8NDY3 354 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 OR4D5Q8NGN0 318 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 TP53RKQ96S44 253 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF286AQ9HBT8 521 aa7.95□□□□□ -1.14
CAPN3-206ENST00000397163 ASCC3Q8N3C0 2202 aaKnown RBP7.94□□□□□ -1.14
CAPN3-206ENST00000397163 XKRY2A2RUG3 117 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 TOX3O15405 576 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-206ENST00000397163 PITX3O75364 302 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 IGLV3-1P01715 115 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 CTSSP25774 331 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 MSX1P28360 303 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
CAPN3-206ENST00000397163 ICAM4Q14773 271 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 PDCD1Q15116 288 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 FAM185AQ8N0U4 392 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 OR10G3Q8NGC4 313 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 OR5C1Q8NGR4 320 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 RBM24Q9BX46 236 aaKnown RBP7.94□□□□□ -1.14
CAPN3-206ENST00000397163 PLEKHF2Q9H8W4 249 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 UBE2J1Q9Y385 318 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-206ENST00000397163 SELEP16581 610 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 AADACP22760 399 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 CEACAM6P40199 344 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 GLIPR1P48060 266 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 RUNX1Q01196 453 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 HERPUD1Q15011 391 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 SPIN3Q5JUX0 258 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF695Q8IW36 515 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM183AQ8IXX5 376 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM252Q8N6L7 170 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 OR4X1Q8NH49 305 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 OR2AE1Q8NHA4 323 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM171Q8WVE6 324 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 GUCD1Q96NT3 240 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 ANGPTL4Q9BY76 406 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 ARHGAP21Q5T5U3 1957 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 ASXL3Q9C0F0 2248 aa7.94□□□□□ -1.14
CAPN3-206ENST00000397163 TGOLN2O43493 480 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 DFFBO76075 338 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 HSPB1P04792 205 aaKnown RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 RAB4AP20338 218 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 RAB11AP62491 216 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 HIST3H3Q16695 136 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SNAI3Q3KNW1 292 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 PIGYQ3MUY2 71 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 Q6ZS52 159 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 D2HGDHQ8N465 521 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 BEND2Q8NDZ0 799 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 OR8G5Q8NG78 346 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 MOB3AQ96BX8 217 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 BORCS8Q96FH0 119 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 FGF21Q9NSA1 209 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 PPIAL4AQ9Y536 164 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 C3orf85A0A1B0GTC6 90 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 A0A1B0GUS0 222 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 DVL1O14640 695 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 OR3A1P47881 315 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 DYNLT3P51808 116 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 MRPS11P82912 194 aaKnown RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 COTL1Q14019 142 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ENDOGQ14249 297 aaKnown RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ANKRD37Q7Z713 158 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 CMTM1Q8IZ96 169 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 OR1P1Q8NH06 330 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SPTSSAQ969W0 71 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SPSB1Q96BD6 273 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SPIN2AQ99865 258 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SPIN2BQ9BPZ2 258 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SHANK1Q9Y566 2161 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 AQP7P3A6NL99 342 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 TRDCB7Z8K6 153 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ETV2O00321 342 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 MPPED1O15442 326 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 CDS2O95674 445 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 RPLP1P05386 114 aaKnown RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 IRF2P14316 349 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ERVS71-1P61550 626 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 HLA-DRB3P79483 266 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 RSPO1Q2MKA7 263 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 SLC25A53Q5H9E4 307 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 CXorf66Q5JRM2 361 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF506Q5JVG8 444 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 PHYHD1Q5SRE7 291 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 PLXDC1Q8IUK5 500 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 R3HDM4Q96D70 268 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 GNPNAT1Q96EK6 184 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-206ENST00000397163 CABLES2Q9BTV7 478 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 WNT5BQ9H1J7 359 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF442Q9H7R0 627 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms