RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 HSD17B6O14756 317 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 MPZL2O60487 215 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 KDM4BO94953 1096 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 IGHV3-7P01780 117 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 RAP2AP10114 183 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 VDAC1P21796 283 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 PSMB8P28062 276 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 GLP1RP43220 463 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 SCN1BQ07699 218 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 ZNF816Q0VGE8 651 aaPredicted RBP11.65□□□□□ -0.54
SEC13-206ENST00000397102 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 ASPHD1Q5U4P2 390 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 Q6P435 159 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 LHFPL2Q6ZUX7 228 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 DHFR2Q86XF0 187 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 Q8N6K4 173 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 YIPF7Q8N8F6 280 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 ZNF565Q8N9K5 539 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 CLN6Q9NWW5 311 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 TAGLN3Q9UI15 199 aa11.65□□□□□ -0.54
SEC13-206ENST00000397102 IGKV1-9A0A0C4DH69 117 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 IL1AP01583 271 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 KRT8P05787 483 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 GP9P14770 177 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 SPNP16150 400 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 PRKACBP22694 351 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 VEGFCP49767 419 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 GNG10P50151 68 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 MNAT1P51948 309 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 ZNF616Q08AN1 781 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 OSBPL10Q9BXB5 764 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 RHOFQ9HBH0 211 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
SEC13-206ENST00000397102 IGHV1-3A0A0C4DH29 117 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 I3L521 148 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 GNGT2O14610 69 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 JTBO76095 146 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 GAPDHP04406 335 aaKnown RBP11.63□□□□□ -0.55
SEC13-206ENST00000397102 ANXA8P13928 327 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 ATF1P18846 271 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 RUNX1Q01196 453 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 SLC16A12Q6ZSM3 486 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 UTS2BQ765I0 119 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 SSX6Q7RTT6 188 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 MOB3BQ86TA1 216 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 HS3ST5Q8IZT8 346 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 OR10X1Q8NGY0 326 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 SPSB1Q96BD6 273 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 ADAT3Q96EY9 351 aaPredicted RBP11.63□□□□□ -0.55
SEC13-206ENST00000397102 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 RASL11BQ9BPW5 248 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 NCOR1P1Q9H4R4 102 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 ARL8BQ9NVJ2 186 aa11.63□□□□□ -0.55
SEC13-206ENST00000397102 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 TRIM64CA6NLI5 447 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 NPIPB11E5RHQ5 1161 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 OVOL1O14753 267 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 DEGS1O15121 323 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 PRKYO43930 277 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 SAP30O75446 220 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 IGF1P05019 195 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 C21orf33P30042 268 aaPredicted RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 CRISP1P54107 249 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 TRIM25Q14258 630 aaKnown RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 LTC4SQ16873 150 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 NXNL2Q5VZ03 156 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 BCDIN3DQ7Z5W3 292 aaKnown RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 RFT1Q96AA3 541 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 KCTD7Q96MP8 289 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 S1PR3Q99500 378 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 HSPB9Q9BQS6 159 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 PLSCR3Q9NRY6 295 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 CHCHD3Q9NX63 227 aaKnown RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 H2AFY2Q9P0M6 372 aaPredicted RBP11.62□□□□□ -0.55
SEC13-206ENST00000397102 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
SEC13-206ENST00000397102 PRKACGP22612 351 aa11.61□□□□□ -0.55
SEC13-206ENST00000397102 HTR1FP30939 366 aa11.61□□□□□ -0.55
SEC13-206ENST00000397102 REG1BP48304 166 aa11.61□□□□□ -0.55
SEC13-206ENST00000397102 MS4A2Q01362 244 aa11.61□□□□□ -0.55
SEC13-206ENST00000397102 KIAA0141Q14154 515 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms