RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ANGPTL6Q8NI99 470 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 MYOZ1Q9NP98 299 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-204ENST00000396548 DCAF16Q9NXF7 216 aa10.65□□□□□ -0.7
TRIM39-204ENST00000396548 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.71
TRIM39-204ENST00000396548 PFDN1O60925 122 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 VSIG10L2P0DP72 767 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 PRDX2P32119 198 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 PPOXP50336 477 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 RAB25P57735 213 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 GRK1Q15835 563 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 STUMQ69YW2 141 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 C5orf24Q7Z6I8 188 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 MBNL3Q9NUK0 354 aaKnown RBP10.65□□□□□ -0.71
TRIM39-204ENST00000396548 VSIG4Q9Y279 399 aa10.65□□□□□ -0.71
TRIM39-204ENST00000396548 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 CYB5R3P00387 301 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-204ENST00000396548 CSN2P05814 226 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 DANCRP0C864 163 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 GSTT2P0CG29 244 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 TNFRSF1AP19438 455 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 COL10A1Q03692 680 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 PAN3Q58A45 887 aaKnown RBP10.64□□□□□ -0.71
TRIM39-204ENST00000396548 PEG10Q86TG7 708 aaKnown RBP10.64□□□□□ -0.71
TRIM39-204ENST00000396548 COQ2Q96H96 371 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-204ENST00000396548 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 PPP1R3CQ9UQK1 317 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 ZFYVE26Q68DK2 2539 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 IGKV1-6A0A0C4DH72 117 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 HERPUD1Q15011 391 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-204ENST00000396548 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 GIMAP1Q8WWP7 306 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 MED30Q96HR3 178 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 GLS2Q9UI32 602 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 DSCAMO60469 2012 aa10.64□□□□□ -0.71
TRIM39-204ENST00000396548 IGHV3OR15-7A0A075B7D8 119 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 SDCBPO00560 298 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-204ENST00000396548 IL5P05113 134 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 ANXA7P20073 488 aaKnown RBP10.63□□□□□ -0.71
TRIM39-204ENST00000396548 CD80P33681 288 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 MRPS15P82914 257 aaKnown RBP10.63□□□□□ -0.71
TRIM39-204ENST00000396548 CD300CQ08708 224 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 CARTPTQ16568 116 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 CHRFAM7AQ494W8 412 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 GLDNQ6ZMI3 551 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-204ENST00000396548 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 ZDHHC22Q8N966 263 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 OR5T2Q8NGG2 359 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 TRDCB7Z8K6 153 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM178BH3BS89 294 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 HPXP02790 462 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 TRAPPC2P0DI81 140 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 TRAPPC2BP0DI82 140 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 SLC35E4Q6ICL7 350 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 SDSLQ96GA7 329 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 SAP30LQ9HAJ7 183 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 NECAP2Q9NVZ3 263 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 EHFQ9NZC4 300 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 OR5H14A6NHG9 310 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 HMX3A6NHT5 357 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 DHFRP00374 187 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 KCNJ3P48549 501 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 GPR132Q9UNW8 380 aa10.63□□□□□ -0.71
TRIM39-204ENST00000396548 KLF2Q9Y5W3 355 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-204ENST00000396548 PRAF2O60831 178 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 SCTP09683 121 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 RCC1P18754 421 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-204ENST00000396548 SCGB2B2Q4G0G5 96 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 EGLN1Q9GZT9 426 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 CBLN4Q9NTU7 201 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 A6NNC1 897 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 SOD3P08294 240 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 ATXN7L3Q14CW9 347 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-204ENST00000396548 IGSF11Q5DX21 431 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 OR11L1Q8NGX0 322 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 CABLES2Q9BTV7 478 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 MAB21L2Q9Y586 359 aa10.62□□□□□ -0.71
TRIM39-204ENST00000396548 H7C1Q1 480 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 OR5H8P0DN80 308 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 MUC1P15941 1255 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 OR3A3P47888 321 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 HMGN3Q15651 99 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 SLC25A42Q86VD7 318 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 RTBDNQ9BSG5 229 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 CHMP1AQ9HD42 196 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 DYNLRB1Q9NP97 96 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 CLEC18AA5D8T8 446 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 OOEPA6NGQ2 149 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 K7N7A8 449 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 FCN3O75636 299 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 IFNA6P05013 189 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 ARPC4P59998 168 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms