RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 PIGMQ9H3S5 423 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 URGCP-MRPS24S4R325 110 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 AGFG2O95081 481 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 PRF1P14222 555 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 FKBP2P26885 142 aaKnown RBP12.47□□□□□ -0.41
SREBF1-205ENST00000395757 CEBPDP49716 269 aaPredicted RBP12.47□□□□□ -0.41
SREBF1-205ENST00000395757 FUT6P51993 359 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 KCNE4Q8WWG9 221 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 TTTY12Q9BZ98 90 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
SREBF1-205ENST00000395757 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
SREBF1-205ENST00000395757 USF3Q68DE3 2245 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 SMPD2O60906 423 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 NXPH2O95156 264 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 COX5BP10606 129 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 HAGHQ16775 308 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 ZDHHC23Q8IYP9 409 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 SVBPQ8N300 66 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 KDF1Q8NAX2 398 aaPredicted RBP12.46□□□□□ -0.41
SREBF1-205ENST00000395757 TRIB1Q96RU8 372 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 RAB18Q9NP72 206 aa12.46□□□□□ -0.41
SREBF1-205ENST00000395757 MUC6Q6W4X9 2439 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 C9orf172C9J069 976 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.42
SREBF1-205ENST00000395757 PDCD6O75340 191 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 H3F3AP84243 136 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 HFEQ30201 348 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 PUSL1Q8N0Z8 303 aaKnown RBP12.46□□□□□ -0.42
SREBF1-205ENST00000395757 OR8U1Q8NH10 309 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 FAM173AQ9BQD7 235 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 REG4Q9BYZ8 158 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 COA4Q9NYJ1 87 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 NKX2-6A6NCS4 301 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 ST8SIA3O43173 380 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 MELTFP08582 738 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 CD46P15529 392 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 SLC25A53Q5H9E4 307 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 Q96M66 194 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 CRIM1Q9NZV1 1036 aa12.46□□□□□ -0.42
SREBF1-205ENST00000395757 ERRFI1Q9UJM3 462 aaPredicted RBP12.46□□□□□ -0.42
SREBF1-205ENST00000395757 A0A0U1RQV5 110 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 S100GP29377 79 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 MIDNQ504T8 468 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 LGI3Q8N145 548 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 SVIPQ8NHG7 77 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 LIPGQ9Y5X9 500 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 ADAM20O43506 726 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 SYNGR3O43761 229 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 LILRA1O75019 489 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-205ENST00000395757 CMTM1Q8IZ96 169 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 GAPTQ8N292 157 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 CCDC71LQ8N9Z2 235 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 TMEM54Q969K7 222 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 ARHGAP21Q5T5U3 1957 aa12.45□□□□□ -0.42
SREBF1-205ENST00000395757 DBX1A6NMT0 343 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NKX2-8O15522 239 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 LPAR6P43657 344 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
SREBF1-205ENST00000395757 TRA2AQ13595 282 aaKnown RBP eCLIP12.44□□□□□ -0.42
SREBF1-205ENST00000395757 VAX1Q5SQQ9 334 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 GPR157Q5UAW9 335 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 GGNQ86UU5 652 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 WDR5BQ86VZ2 330 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 SLC35G3Q8N808 338 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 OCSTAMPQ9BR26 566 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 SH3BGRL3Q9H299 93 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 LIME1Q9H400 295 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 SPACA1Q9HBV2 294 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 PPP1R14DQ9NXH3 145 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NUP210LQ5VU65 1888 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NPIPB13A6NJU9 1138 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 CD300LBA8K4G0 201 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NPIPB4C9JG80 1138 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NPBWR1P48145 328 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 C14orf79Q96F83 325 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 GHRLQ9UBU3 117 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 CDIPTO14735 213 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 DEGS1O15121 323 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 SOX15O60248 233 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 SNAPINO95295 136 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 CD8AP01732 235 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 CST2P09228 141 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 RUNX1Q01196 453 aa12.44□□□□□ -0.42
SREBF1-205ENST00000395757 GLYATL2Q8WU03 294 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms