RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GDPD3Q7L5L3 318 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 MOGAT3Q86VF5 341 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 ZCCHC24Q8N2G6 241 aaKnown RBP9.56□□□□□ -0.88
RTN1-203ENST00000395090 TOMM5Q8N4H5 51 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 GCSAMQ8N6F7 178 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 LRRC29Q8WV35 223 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 SULT4A1Q9BR01 284 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 FAAP24Q9BTP7 215 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 EGLN1Q9GZT9 426 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 C11orf54Q9H0W9 315 aaPredicted RBP9.56□□□□□ -0.88
RTN1-203ENST00000395090 WDR13Q9H1Z4 485 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 SPACA1Q9HBV2 294 aa9.56□□□□□ -0.88
RTN1-203ENST00000395090 RALYQ9UKM9 306 aaKnown RBP9.56□□□□□ -0.88
RTN1-203ENST00000395090 ARFGEF3Q5TH69 2177 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 CHD3Q12873 2000 aaKnown RBP9.55□□□□□ -0.88
RTN1-203ENST00000395090 TRAV24A0A0B4J272 114 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 LOC100996750A0A140TA64 210 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 WNT9BO14905 357 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 DEGS1O15121 323 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 CD8AP01732 235 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 DANCRP0C864 163 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 GLRA1P23415 457 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 DUSP1P28562 367 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 CBX5P45973 191 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 RFX2P48378 723 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 INPP1P49441 399 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 GNG2P59768 71 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 AP3S2P59780 193 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 ACTBP60709 375 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 ACTG1P63261 375 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 RNASE12Q5GAN4 147 aaKnown RBP9.55□□□□□ -0.88
RTN1-203ENST00000395090 AGAP6Q5VW22 663 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 ZNF57Q68EA5 555 aaPredicted RBP9.55□□□□□ -0.88
RTN1-203ENST00000395090 DTX2Q86UW9 622 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 NUDCD2Q8WVJ2 157 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 C7orf50Q9BRJ6 194 aaKnown RBP9.55□□□□□ -0.88
RTN1-203ENST00000395090 KRTAP4-6Q9BYQ5 205 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 CBLN4Q9NTU7 201 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 RNF7Q9UBF6 113 aa9.55□□□□□ -0.88
RTN1-203ENST00000395090 LINC00854A0A1B0GVQ3 168 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 hCG_1807616A0A1W2PRN6 198 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 IFNL4K9M1U5 179 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 SH2D1BO14796 132 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 LYRM1O43325 122 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 CSF1P09603 554 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 PPOXP50336 477 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 SNRPD2P62316 118 aaKnown RBP9.54□□□□□ -0.88
RTN1-203ENST00000395090 SMIM21Q3B7S5 101 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 C11orf71Q6IPW1 123 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 FIP1L1Q6UN15 594 aaKnown RBP9.54□□□□□ -0.88
RTN1-203ENST00000395090 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 TMEM229BQ8NBD8 167 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 DUSP18Q8NEJ0 188 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 NEURL2Q9BR09 285 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 DYNLRB1Q9NP97 96 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 DECR2Q9NUI1 292 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 AK3Q9UIJ7 227 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 PPP1R3CQ9UQK1 317 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 NPTNQ9Y639 398 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 CACNG2Q9Y698 323 aa9.54□□□□□ -0.88
RTN1-203ENST00000395090 CACNA1DQ01668 2161 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SLC33A1O00400 549 aaPredicted RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 CD74P04233 296 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 EGR1P18146 543 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SLC6A1P30531 599 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 RCVRNP35243 200 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 ARFRP1Q13795 201 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 C19orf54Q5BKX5 351 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 ATAD3CQ5T2N8 411 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SHEQ5VZ18 495 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 MZT2BQ6NZ67 158 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 NRARPQ7Z6K4 114 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 HOGA1Q86XE5 327 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SUMF2Q8NBJ7 301 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 OR11L1Q8NGX0 322 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SAP30LQ9HAJ7 183 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 HRASLSQ9HDD0 168 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 TREM2Q9NZC2 230 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 GLS2Q9UI32 602 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 NAP1L6A6NFF2 107 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 OR2H2O95918 312 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 HAND1O96004 215 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 NAPSAO96009 420 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SOD3P08294 240 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 PLA2G2AP14555 144 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 DTYMKP23919 212 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 BTCP35070 178 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 SNU13P55769 128 aaKnown RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 TAS2R19P59542 299 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 HOXA4Q00056 320 aaPredicted RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 RBM39Q14498 530 aaKnown RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
RTN1-203ENST00000395090 GVQW1Q8N7I0 195 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 CMSS1Q9BQ75 279 aaKnown RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 DPCDQ9BVM2 203 aaPredicted RBP9.53□□□□□ -0.88
RTN1-203ENST00000395090 CHST6Q9GZX3 395 aa9.53□□□□□ -0.88
RTN1-203ENST00000395090 RIMS4Q9H426 269 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms