RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PRSS54Q6PEW0 395 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 SAXO1Q8IYX7 474 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 OR5P3Q8WZ94 311 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 PIK3IP1Q96FE7 263 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 C1orf123Q9NWV4 160 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 PTPRBP23467 1997 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 SNRNP70P08621 437 aaKnown RBP11.94□□□□□ -0.5
SNCA-204ENST00000394989 CELA3BP08861 270 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 ZNF14P17017 642 aaPredicted RBP11.94□□□□□ -0.5
SNCA-204ENST00000394989 CD80P33681 288 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 ADAM5Q6NVV9 412 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 GMPPAQ96IJ6 420 aaPredicted RBP11.94□□□□□ -0.5
SNCA-204ENST00000394989 ZNF286AQ9HBT8 521 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 CYTL1Q9NRR1 136 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 UQCC1Q9NVA1 299 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
SNCA-204ENST00000394989 FBXO24O75426 580 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 IGHG3P01860 377 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 ZNF728P0DKX0 622 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 HABP2Q14520 560 aaPredicted RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 SP6Q3SY56 376 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 SPATA46Q5T0L3 261 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 IGFL2Q6UWQ7 119 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 EXTL1Q92935 676 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 GSKIPQ9P0R6 139 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 ESPL1Q14674 2120 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 A0A1W2PR80 420 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A8PA6NJQ4 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A22PA8MWA6 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 F2RL1P55085 397 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 ARL11Q969Q4 196 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 PHYHIPLQ96FC7 376 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 BSNQ9UPA5 3926 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 MED19A0JLT2 244 aaPredicted RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 RNF224P0DH78 156 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 IGHV1-2P23083 117 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 EDARADDQ8WWZ3 215 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
SNCA-204ENST00000394989 MOB3AQ96BX8 217 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 OPA3Q9H6K4 179 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
SNCA-204ENST00000394989 hCG_1809904A0A1W2PP81 198 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 A0A1W2PR64 198 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 A0A1W2PRV1 198 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 NAPSAO96009 420 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 DUSP1P28562 367 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
SNCA-204ENST00000394989 OR11L1Q8NGX0 322 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
SNCA-204ENST00000394989 AKR1E2Q96JD6 320 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 HSPB6O14558 160 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 MUC1P15941 1255 aaPredicted RBP11.92□□□□□ -0.5
SNCA-204ENST00000394989 TMEM187Q14656 261 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 GUSBP1Q15486 140 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
SNCA-204ENST00000394989 GLI4P10075 376 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 AADACP22760 399 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 CA6P23280 308 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
SNCA-204ENST00000394989 GGNBP1Q5YKI7 109 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 ZNF585AQ6P3V2 769 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 DPPA2Q7Z7J5 298 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 GALNT14Q96FL9 552 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 PFDN5Q99471 154 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 A6NLC8 198 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 TRAPPC2LH3BP13 241 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 M0R036 132 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
SNCA-204ENST00000394989 ZNF44P15621 663 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 P4HA3Q7Z4N8 544 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 MKXQ8IYA7 352 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms