RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 C5orf24Q7Z6I8 188 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 RPS19BP1Q86WX3 136 aaKnown RBP15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 MR1Q95460 341 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF251Q9BRH9 671 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 TMEM222Q9H0R3 208 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF391Q9UJN7 358 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A0G2JMM0 328 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A1W2PPB8 328 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 A0A1W2PRS3 328 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 KIR3DP1A8MWS1 328 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF587BE7ETH6 402 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 DNPH1O43598 174 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 OR7C1O76099 320 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 OR8U8P0C7N1 319 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 GNRHRP30968 328 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 GGNQ86UU5 652 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 OR2G3Q8NGZ4 309 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 FOXB1Q99853 325 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 PLSCR2Q9NRY7 297 aa15.79■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF724A8MTY0 619 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 PITX3O75364 302 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 FABP1P07148 127 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 EDN3P14138 238 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 MAS1LP35410 378 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 NKX2-1P43699 371 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 MLF1P58340 268 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 OR2B8PP59922 312 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 RAB1AP62820 205 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 CEACAM16Q2WEN9 425 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SPSB3Q6PJ21 355 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF611Q8N823 705 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF565Q8N9K5 539 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 YPEL4Q96NS1 127 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 GSN-AS1Q9NRJ2 163 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SLC7A10Q9NS82 523 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 PUS1Q9Y606 427 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 FAM186AA6NE01 2351 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF816-ZNF321PA0A0X1KG74 233 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 CDRT15L2A8MXV6 281 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 NQO2P16083 231 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 CARD18P57730 90 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 RPS23P62266 143 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SRPXP78539 464 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 ZNF266Q14584 549 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SOHLH1Q5JUK2 328 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SLC25A26Q70HW3 274 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 DPPA2Q7Z7J5 298 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 TBC1D26Q86UD7 250 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 SUMF2Q8NBJ7 301 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 OR14L1PQ8NHC6 308 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 TMEM171Q8WVE6 324 aa15.78■□□□□ 0.12
PCDHA1-202ENST00000394633 CXCL13O43927 109 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 OMGP23515 440 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 SELENOHQ8IZQ5 122 aaKnown RBP15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 FAM185AQ8N0U4 392 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 ZFP62Q8NB50 900 aaPredicted RBP15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 TMEM56Q96MV1 263 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 NIT2Q9NQR4 276 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 UBE2J1Q9Y385 318 aaPredicted RBP15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 TMEM56-RWDD3S4R434 201 aa15.77■□□□□ 0.12
PCDHA1-202ENST00000394633 RPL36A-HNRNPH2H7BZ11 118 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 SSSCA1O60232 199 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 ZNF695Q8IW36 515 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 ODF3L1Q8IXM7 274 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 TMEM252Q8N6L7 170 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 EXTL1Q92935 676 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 MAGT1Q9H0U3 335 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 SMDT1Q9H4I9 107 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 PLEKHF2Q9H8W4 249 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 GLRX2Q9NS18 164 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 RBFOX3A6NFN3 312 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 B4E171 279 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 PROB1E7EW31 1015 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 OR2C1O95371 312 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 KLK3P07288 261 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 ITGA3P26006 1051 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 SRD5A2P31213 254 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 TSPAN7P41732 249 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 CXorf66Q5JRM2 361 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 SLAMF9Q96A28 289 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 GPHA2Q96T91 129 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 GPR35Q9HC97 309 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 LYRM2Q9NU23 88 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 LAMA5O15230 3695 aa15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 PTPRZ1P23471 2315 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-202ENST00000394633 AP4M1O00189 453 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 ADAM20O43506 726 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 CLN5O75503 358 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 TSC22D1Q15714 1073 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 SPIN3Q5JUX0 258 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 ZNF818PQ6ZRF7 136 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 TECTBQ96PL2 329 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 TCEAL7Q9BRU2 100 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 PAPOLGQ9BWT3 736 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 PARPBPQ9NWS1 579 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 RND3P61587 244 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 TRIP6Q15654 476 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 HIKESHIQ53FT3 197 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 HES3Q5TGS1 186 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 ABLIM2Q6H8Q1 611 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms