RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ANGPTL5Q86XS5 388 aa5□□□□□ -1.61
RFFL-202ENST00000394597 PRSS35Q8N3Z0 413 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZSCAN4Q8NAM6 433 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 APCDD1LQ8NCL9 501 aa5□□□□□ -1.61
RFFL-202ENST00000394597 VN1R17PQ8TDU5 208 aa5□□□□□ -1.61
RFFL-202ENST00000394597 FAHD2AQ96GK7 314 aa5□□□□□ -1.61
RFFL-202ENST00000394597 OR8B4Q96RC9 309 aa5□□□□□ -1.61
RFFL-202ENST00000394597 GAL3ST2Q9H3Q3 398 aa5□□□□□ -1.61
RFFL-202ENST00000394597 RNF122Q9H9V4 155 aa5□□□□□ -1.61
RFFL-202ENST00000394597 SLC22A13Q9Y226 551 aa5□□□□□ -1.61
RFFL-202ENST00000394597 R4GMQ9 66 aa5□□□□□ -1.61
RFFL-202ENST00000394597 KIF26AQ9ULI4 1882 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 RTTNQ86VV8 2226 aa5□□□□□ -1.61
RFFL-202ENST00000394597 A0A1B0GTH9 108 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 TMEM272A0A1B0GTI8 110 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 A8MXE2 369 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 F6UZH7 168 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 EREGO14944 169 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LDLRAD4O15165 306 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CHRM2P08172 466 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LIFP15018 202 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 BLVRBP30043 206 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 SNU13P55769 128 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 SCAND1P57086 179 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 RAC3P60763 192 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 JOSD1Q15040 202 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 PHLDA2Q53GA4 152 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 OTPQ5XKR4 325 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 TMEM183AQ8IXX5 376 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 SLC22A24Q8N4F4 322 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 NKAIN3Q8N8D7 197 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ADAD2Q8NCV1 583 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 BEND2Q8NDZ0 799 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 R3HDM4Q96D70 268 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 FAM122AQ96E09 287 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PGLYRP3Q96LB9 341 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ANGPTL4Q9BY76 406 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 C12orf49Q9H741 205 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MOB1AQ9H8S9 216 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 VSIG4Q9Y279 399 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ANKRD30BLA7E2S9 258 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PHF1O43189 567 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 ASAH2BP0C7U1 165 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 DUSP1P28562 367 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 THBS4P35443 961 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PLPPR5Q32ZL2 321 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 DEGS2Q6QHC5 323 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 HIST3H2BBQ8N257 126 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CYB561D1Q8N8Q1 229 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CPEB3Q8NE35 698 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 OR6X1Q8NH79 312 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 KCNG3Q8TAE7 436 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CMTM2Q8TAZ6 248 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 GALNT14Q96FL9 552 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MARS2Q96GW9 593 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 PLK3Q9H4B4 646 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 BANF2Q9H503 90 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 SLC17A5Q9NRA2 495 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ST6GALNAC2Q9UJ37 374 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ZMIZ1Q9ULJ6 1067 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MRPS28Q9Y2Q9 187 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 PTPRSQ13332 1948 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CACNA1DQ01668 2161 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 CIDEAO60543 219 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 SEC11BP0C7V7 166 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ZNF728P0DKX0 622 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 GABRR1P24046 479 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ZNF93P35789 620 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 NKX2-1P43699 371 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 TAS2R30P59541 319 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LSM6P62312 80 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 FMODQ06828 376 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CLEC18BQ6UXF7 455 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 DOK3Q7L591 496 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 TCTEX1D1Q8N7M0 179 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 OR10D3Q8NH80 312 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ASB10Q8WXI3 467 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PIGCQ92535 297 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 WFIKKN1Q96NZ8 548 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LHX6Q9UPM6 363 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 SLC5A6Q9Y289 635 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LOC107986453A0A1B0GWG9 222 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 TMEM229AB2RXF0 380 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 DXOO77932 396 aaKnown RBP4.99□□□□□ -1.61
RFFL-202ENST00000394597 NXPH3O95157 252 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 THY1P04216 161 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 SOD3P08294 240 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MMP9P14780 707 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CTLA4P16410 223 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CDAP32320 146 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MMP16P51512 607 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 FAM3AP98173 230 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 ZP4Q12836 540 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 CLN3Q13286 438 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PHYHD1Q5SRE7 291 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 RIPPLY2Q5TAB7 128 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 NFAM1Q8NET5 270 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms