RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 WNT9BO14905 357 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 PPYP01298 95 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF16P17020 682 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF154Q13106 437 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 DAZAP2Q15038 168 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 PRAMEF6Q5VXH4 476 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 SPERTQ8NA61 448 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 SCARB1Q8WTV0 552 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 RNF126Q9BV68 326 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 RAB18Q9NP72 206 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 UBE2J1Q9Y385 318 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 CTSDP07339 412 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 RPS2P15880 293 aaKnown RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 ARHGDIBP52566 201 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 TMEM211Q6ICI0 200 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 PDZD9Q8IXQ8 264 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 CISD2Q8N5K1 135 aaKnown RBP9.49□□□□□ -0.89
TCOF1-203ENST00000394269 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 C2orf50Q96LR7 162 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 GLRX2Q9NS18 164 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 IL36GQ9NZH8 169 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 TRAPPC2LQ9UL33 140 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 DBX1A6NMT0 343 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 M0R1B8 84 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 SIGLEC5O15389 551 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 NMBP08949 121 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 CECR9P0C854 216 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 WNT2BQ93097 391 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 KIRREL1Q96J84 757 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 SLC5A7Q9GZV3 580 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 DKK4Q9UBT3 224 aa9.49□□□□□ -0.89
TCOF1-203ENST00000394269 OR2F2O95006 317 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 GCH1P30793 250 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 ASCL1P50553 236 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 OR2F1Q13607 317 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 DHRS11Q6UWP2 260 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 WDR86Q86TI4 376 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 TPRX1Q8N7U7 411 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 TMED6Q8WW62 240 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 STARD4Q96DR4 205 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 PLPPR2Q96GM1 343 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 ABHD17AQ96GS6 310 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 SYT3Q9BQG1 590 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 PARP12Q9H0J9 701 aaKnown RBP9.48□□□□□ -0.89
TCOF1-203ENST00000394269 TMEM100Q9NV29 134 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 FBXO9Q9UK97 447 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-203ENST00000394269 POLQO75417 2590 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 OR5B21A6NL26 309 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 GNRHRP30968 328 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 AKR1C2P52895 323 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 AKR1C1Q04828 323 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 INO80CQ6PI98 192 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-203ENST00000394269 IGFL2Q6UWQ7 119 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 GAPTQ8N292 157 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 OR51I2Q9H344 312 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 CCL28Q9NRJ3 127 aa9.48□□□□□ -0.89
TCOF1-203ENST00000394269 CRYM-AS1A6NIL9 109 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 FBXO24O75426 580 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 CA11O75493 328 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 OR2A2Q6IF42 318 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 BCL2L14Q9BZR8 327 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 NMES1Q9C002 83 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 SDHAF2Q9NX18 166 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 TREM2Q9NZC2 230 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 ERRFI1Q9UJM3 462 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-203ENST00000394269 MEMO1Q9Y316 297 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 AUP1Q9Y679 476 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 CREBBPQ92793 2442 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 ARHGAP21Q5T5U3 1957 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 IGKV1D-13A0A0B4J2D9 117 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 AHRRA9YTQ3 701 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 BCL2L11O43521 198 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 IGKV1-13P0DP09 117 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-203ENST00000394269 AANATQ16613 207 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 LTC4SQ16873 150 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 TMEM65Q6PI78 240 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 WDR31Q8NA23 367 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 ANGPTL6Q8NI99 470 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 TP53RKQ96S44 253 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 ARPC5LQ9BPX5 153 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 Q9N2K0 584 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 TNFSF13O75888 250 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 RRASP10301 218 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 HLA-GP17693 338 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 MAGT1Q9H0U3 335 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 OPA3Q9H6K4 179 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 GP6Q9HCN6 339 aa9.47□□□□□ -0.89
TCOF1-203ENST00000394269 KCNS2Q9ULS6 477 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms