RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CHST4Q8NCG5 386 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM104Q8NE00 496 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR51T1Q8NGJ9 327 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR13A1Q8NGR1 328 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 PPP1R35Q8TAP8 253 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 UBALD1Q8TB05 177 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 TBC1D15Q8TC07 691 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 SSMEM1Q8WWF3 244 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 DYRK2Q92630 601 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 S100A13Q99584 98 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 DPCDQ9BVM2 203 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 BANF2Q9H503 90 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZMAT3Q9HA38 289 aaKnown RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 IL36GQ9NZH8 169 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 KIF25Q9UIL4 384 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 FOXJ3Q9UPW0 622 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LINC00312Q9Y6C7 94 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 MEIKINA0A087WXM9 373 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 TRGV10A0A0A0MS01 117 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 IGHV2-26A0A0B4J1V2 119 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 hCG_1809904A0A1W2PP81 198 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A1W2PPE2 198 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A1W2PR64 198 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A1W2PRV1 198 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 H3BUX3 64 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 GPR137BO60478 399 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 CRTAPO75718 401 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 SC5DO75845 299 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 IGHV3-7P01780 117 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MAPK3P27361 379 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 CFPP27918 469 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 ERP29P30040 261 aaKnown RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 RAB13P51153 203 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 FABP5Q01469 135 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 EMX1Q04741 257 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MLLT11Q13015 90 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 TPBGQ13641 420 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 TBCEQ15813 527 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 SSX1Q16384 188 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MIDNQ504T8 468 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 HSD17B12Q53GQ0 312 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 ATAD3CQ5T2N8 411 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 RSBN1Q5VWQ0 802 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MS4A15Q8N5U1 240 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 BEND2Q8NDZ0 799 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 Q8NFD4 153 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR13D1Q8NGV5 346 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MRGPRDQ8TDS7 321 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 LEAP2Q969E1 77 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 FOXRED1Q96CU9 486 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 GFI1Q99684 422 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 MGLLQ99685 303 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 SELENOIQ9C0D9 397 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM133Q9H2Q1 129 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 HEXA-AS1Q9H8Q6 139 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 RHOFQ9HBH0 211 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF286AQ9HBT8 521 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 TCF7L1Q9HCS4 588 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 ACOT13Q9NPJ3 140 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 C1RLQ9NZP8 487 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 BLOC1S6Q9UL45 172 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 UBE2J1Q9Y385 318 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 SESN1Q9Y6P5 492 aa6.22□□□□□ -1.41
HMGB3P1-201ENST00000393368 CMYA5Q8N3K9 4069 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 J3QL48 77 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 DENRO43583 198 aaKnown RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 MPIG6BO95866 241 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 RBP4P02753 201 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CSN2P05814 226 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 UCHL1P09936 223 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 GTF2F2P13984 249 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 MGMTP16455 207 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CPEP16870 476 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 NFYBP25208 207 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 CALRP27797 417 aaKnown RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 SSTR5P35346 364 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 COMPP49747 757 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 RAG2P55895 527 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 LGALS4P56470 323 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 GABARAPL2P60520 117 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 GPR50Q13585 617 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 P2RY14Q15391 338 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM189A2Q15884 450 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 SSX2Q16385 188 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 LRRC75BQ2VPJ9 315 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 NHLRC3Q5JS37 347 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF626Q68DY1 528 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM53AQ6NSI3 398 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF367Q7RTV3 350 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 C5orf24Q7Z6I8 188 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 SPARTQ8N0X7 666 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM86BQ8N661 226 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 C3orf56Q8N813 242 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 NKAIN3Q8N8D7 197 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR11H6Q8NGC7 330 aa6.21□□□□□ -1.42
HMGB3P1-201ENST00000393368 RFESDQ8TAC1 157 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms