RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 KIR3DP1A8MWS1 328 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 TNFSF11O14788 317 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 GZMBP10144 247 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 COX5BP10606 129 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 CSNK1A1P48729 337 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 TMEM187Q14656 261 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 GPR157Q5UAW9 335 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 C20orf196Q8IYI0 205 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 HAS2Q92819 552 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 PIGTQ969N2 578 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 LYZL4Q96KX0 146 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 TP53TG5Q9Y2B4 290 aa15.31■□□□□ 0.04
SQSTM1-202ENST00000389805 A0A087WWC5 75 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 CCDC187A0A096LP49 1063 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 LIFP15018 202 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 RPL23AP62750 156 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 RPS19BP1Q86WX3 136 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 CST7O76096 145 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 SSR4P51571 173 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 NUTF2P61970 127 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 OR14J1Q9UGF5 321 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 A0A0J9YW62 118 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 NTN3O00634 580 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 MMP9P14780 707 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 RAB11AP62491 216 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 RSPO1Q2MKA7 263 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 TMEM171Q8WVE6 324 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 FAAP24Q9BTP7 215 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 ANGPTL4Q9BY76 406 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 NAA60Q9H7X0 242 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 DKKL1Q9UK85 242 aa15.3■□□□□ 0.04
SQSTM1-202ENST00000389805 MSTNO14793 375 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 ZNF728P0DKX0 622 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 FCGR2AP12318 317 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 ZFP36L1Q07352 338 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 GNMTQ14749 295 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 YRDCQ86U90 279 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 UBALD2Q8IYN6 164 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 MAML2Q8IZL2 1156 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 C1orf87Q8N0U7 546 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 PGAM5Q96HS1 289 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 A0A1B0GW64 132 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 IGSF23A1L1A6 192 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 NPIPA2E9PIF3 369 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 NPIPA3F8WFD2 350 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 PHF1O43189 567 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 TDGF1P13385 188 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 HLA-DRB3P79483 266 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 ENDOGQ14249 297 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 CLEC12BQ2HXU8 276 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 SLC22A25Q6T423 547 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 FAM89BQ8N5H3 189 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 OR2Y1Q8NGV0 311 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 SRXN1Q9BYN0 137 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 KIAA1456Q9P272 454 aa15.29■□□□□ 0.04
SQSTM1-202ENST00000389805 FGF7P21781 194 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 DUSP1P28562 367 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 NTF4P34130 210 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 OR14L1PQ8NHC6 308 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 DDA1Q9BW61 102 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 AMBPP02760 352 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 FAHP16930 419 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 WDR5BQ86VZ2 330 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 FBXL14Q8N1E6 418 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 OR2C3Q8N628 320 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 BOD1Q96IK1 185 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 GPR87Q9BY21 358 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 MOB1AQ9H8S9 216 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 SIRT7Q9NRC8 400 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 GNG13Q9P2W3 67 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 ANXA10Q9UJ72 324 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 KNTC1P50748 2209 aa15.28■□□□□ 0.04
SQSTM1-202ENST00000389805 LAMTOR5O43504 91 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 MMP7P09237 267 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 MSR1P21757 451 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 DSCR4P56555 118 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 FOXO1Q12778 655 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 JOSD1Q15040 202 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 EXT1Q16394 746 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 KCNMB1Q16558 191 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 TCEAL6Q6IPX3 200 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 ZIC4Q8N9L1 334 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 OR5R1Q8NH85 324 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 NDUFAF3Q9BU61 184 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 FRYQ5TBA9 3013 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 LOC102725191A0A1B0GVB3 256 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 FAM230AA0A1W2PPH8 454 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 MKRN2OSH3BPM6 223 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 OTX2P32243 289 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 CD200P41217 278 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 TAF9Q16594 264 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 WDR25Q64LD2 544 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 CRIP3Q6Q6R5 217 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 FAM180AQ6UWF9 173 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 NECAP1Q8NC96 275 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 OR5C1Q8NGR4 320 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 OR13D1Q8NGV5 346 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms