RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 PPP1R1CQ8WVI7 109 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 HES4Q9HCC6 221 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 C1orf123Q9NWV4 160 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 C11orf87Q6NUJ2 197 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF880Q6PDB4 577 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 FAM210AQ96ND0 272 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 RAXQ9Y2V3 346 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 C13orf42A0A1B0GVH6 325 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 MPC2O95563 127 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 DIRAS3O95661 229 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 IFNA7P01567 189 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF250P15622 560 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 AADACP22760 399 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 GLRXP35754 106 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 PIGPP57054 158 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 FAM27E3Q08E93 113 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 PAN3Q58A45 887 aaKnown RBP21.35■■□□□ 1.01
SHOX2-201ENST00000389589 ALKBH2Q6NS38 261 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 TMUB2Q71RG4 321 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF546Q86UE3 836 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 LILRB4Q8NHJ6 448 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 ASF1BQ9NVP2 202 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 KCNIP3Q9Y2W7 256 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 DSPP15924 2871 aaKnown RBP21.35■■□□□ 1.01
SHOX2-201ENST00000389589 MAP1BP46821 2468 aaKnown RBP21.35■■□□□ 1.01
SHOX2-201ENST00000389589 OR2H2O95918 312 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 PPYP01298 95 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 C11orf53Q8IXP5 236 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 OR5T2Q8NGG2 359 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 SYT3Q9BQG1 590 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 RSRP1Q9BUV0 290 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 MFFQ9GZY8 342 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 GLS2Q9UI32 602 aa21.35■■□□□ 1.01
SHOX2-201ENST00000389589 RP1L1Q8IWN7 2480 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF205O95201 554 aa21.34■■□□□ 1.01
SHOX2-201ENST00000389589 HTR2BP41595 481 aa21.34■■□□□ 1.01
SHOX2-201ENST00000389589 VRK1Q99986 396 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-201ENST00000389589 METTL8Q9H825 291 aaKnown RBP21.34■■□□□ 1.01
SHOX2-201ENST00000389589 MSL2Q9HCI7 577 aa21.34■■□□□ 1.01
SHOX2-201ENST00000389589 SLC33A1O00400 549 aaPredicted RBP21.33■■□□□ 1.01
SHOX2-201ENST00000389589 SCTP09683 121 aa21.33■■□□□ 1.01
SHOX2-201ENST00000389589 NKX6-1P78426 367 aaPredicted RBP21.33■■□□□ 1.01
SHOX2-201ENST00000389589 MOB1BQ7L9L4 216 aa21.33■■□□□ 1.01
SHOX2-201ENST00000389589 CCDC71LQ8N9Z2 235 aa21.33■■□□□ 1.01
SHOX2-201ENST00000389589 NAA60Q9H7X0 242 aa21.33■■□□□ 1.01
SHOX2-201ENST00000389589 TMEM165Q9HC07 324 aa21.33■■□□□ 1.01
SHOX2-201ENST00000389589 IGHV3-13P01766 116 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 RPS23P62266 143 aaKnown RBP21.33■■□□□ 1
SHOX2-201ENST00000389589 OR4A4PQ8NGN8 299 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 THAP6Q8TBB0 222 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 RTN4IP1Q8WWV3 396 aaPredicted RBP21.33■■□□□ 1
SHOX2-201ENST00000389589 GALNT14Q96FL9 552 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 ARL6Q9H0F7 186 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 RASL12Q9NYN1 266 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 PRR13Q9NZ81 148 aa21.33■■□□□ 1
SHOX2-201ENST00000389589 IGHV3-64DA0A0J9YX35 117 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 A6NLC8 198 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 C3orf80F5H4A9 247 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 SIRPB1O00241 398 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 ADAP1O75689 374 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 PSMB6P28072 239 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 SLC2A9Q9NRM0 540 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 BET1O15155 118 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 LRRC37A5PQ49AS3 106 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 PRR30Q53SZ7 412 aaPredicted RBP21.32■■□□□ 1
SHOX2-201ENST00000389589 C20orf204Q6ZNR8 217 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 FAM185AQ8N0U4 392 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 RDH8Q9NYR8 311 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 PCDHB10Q9UN67 800 aa21.32■■□□□ 1
SHOX2-201ENST00000389589 A0A0D9SG52 128 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 C16orf97H3BN30 126 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 HAND1O96004 215 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 S100A1P23297 94 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 KLF3P57682 345 aaPredicted RBP21.31■■□□□ 1
SHOX2-201ENST00000389589 HLA-DRB3P79483 266 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 WDR82Q6UXN9 313 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 ZNF497Q6ZNH5 498 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 SSX8Q7RTT4 187 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 GAPTQ8N292 157 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 C2orf50Q96LR7 162 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 SUCNR1Q9BXA5 334 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 JKAMPQ9P055 326 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 DUSP13Q9UII6 198 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 TNFSF18Q9UNG2 199 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 PIEZO2Q9H5I5 2752 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 BSNQ9UPA5 3926 aa21.31■■□□□ 1
SHOX2-201ENST00000389589 RP2O75695 350 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 CD200P41217 278 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 ZNF345Q14585 488 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 HERPUD1Q15011 391 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 PRAMEF6Q5VXH4 476 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 ZNF826PQ6ZT77 177 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 UBQLN2Q9UHD9 624 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 MAB21L2Q9Y586 359 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 C1QTNF9BB2RNN3 333 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 TUSC2O75896 110 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 SH3BGRL2Q9UJC5 107 aa21.3■■□□□ 1
SHOX2-201ENST00000389589 ATMQ13315 3056 aa21.29■■□□□ 1
SHOX2-201ENST00000389589 OR2F2O95006 317 aa21.29■■□□□ 1
SHOX2-201ENST00000389589 LMO1P25800 156 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms