RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 IDO2Q6ZQW0 420 aa22.47■■□□□ 1.19
MSX1-201ENST00000382723 GINS4Q9BRT9 223 aa22.47■■□□□ 1.19
MSX1-201ENST00000382723 FLVCR2Q9UPI3 526 aa22.47■■□□□ 1.19
MSX1-201ENST00000382723 INMT-MINDY4F8WBC2 141 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 TMEM178BH3BS89 294 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 C17orf107Q6ZR85 190 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 BTN2A1Q7KYR7 527 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 C20orf85Q9H1P6 137 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 RIMS4Q9H426 269 aaPredicted RBP22.46■■□□□ 1.19
MSX1-201ENST00000382723 Q9N2K0 584 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 EHFQ9NZC4 300 aa22.46■■□□□ 1.19
MSX1-201ENST00000382723 OOEPA6NGQ2 149 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 ZNF497Q6ZNH5 498 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 DTX2Q86UW9 622 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 C1orf87Q8N0U7 546 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 ANGPTL6Q8NI99 470 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 CCDC107Q8WV48 283 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 SPOCK3Q9BQ16 436 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 SCP2D1Q9UJQ7 156 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 LRBAP50851 2863 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 A1L4Q6 167 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 NDUFB6O95139 128 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 OR3A1P47881 315 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 RBMS2Q15434 407 aaKnown RBP22.45■■□□□ 1.18
MSX1-201ENST00000382723 VAX1Q5SQQ9 334 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 SHEQ5VZ18 495 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 C5orf24Q7Z6I8 188 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 TRAF4Q9BUZ4 470 aaPredicted RBP22.45■■□□□ 1.18
MSX1-201ENST00000382723 ZNF222Q9UK12 451 aa22.45■■□□□ 1.18
MSX1-201ENST00000382723 DYSFO75923 2080 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 GYPAP02724 150 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 H2AFB2P0C5Z0 115 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 TSPAN5P62079 268 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 RAB1BQ9H0U4 201 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 ARFGEF3Q5TH69 2177 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 COL12A1Q99715 3063 aa22.44■■□□□ 1.18
MSX1-201ENST00000382723 TRAV39A0A0B4J263 110 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 LYNX1G3V0Z9 82 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 GSTT2P0CG29 244 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 LYNX1P0DP58 116 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 AESQ08117 197 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 CDK10Q15131 360 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 GRK1Q15835 563 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 CARTPTQ16568 116 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 TEX36Q5VZQ5 186 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 STUMQ69YW2 141 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 PRRT1Q99946 306 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 SHARPINQ9H0F6 387 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 FBXO9Q9UK97 447 aaPredicted RBP22.43■■□□□ 1.18
MSX1-201ENST00000382723 ARPC1BO15143 372 aaKnown RBP22.43■■□□□ 1.18
MSX1-201ENST00000382723 MUC1P15941 1255 aaPredicted RBP22.43■■□□□ 1.18
MSX1-201ENST00000382723 RCC1P18754 421 aaPredicted RBP22.43■■□□□ 1.18
MSX1-201ENST00000382723 HFEQ30201 348 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 OVCH2Q7RTZ1 564 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 ZNRF1Q8ND25 227 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 TRAPPC2LQ9UL33 140 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 FAM208BQ5VWN6 2430 aa22.43■■□□□ 1.18
MSX1-201ENST00000382723 PPIAL4EA0A075B759 164 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 PPIAL4DF5H284 164 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 ZNF737O75373 536 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 CLDN1O95832 211 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 PPIAL4FP0DN26 164 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 CCL13Q99616 98 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 BEX2Q9BXY8 128 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 SEBOXQ9HB31 216 aaPredicted RBP22.42■■□□□ 1.18
MSX1-201ENST00000382723 BEX1Q9HBH7 125 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 PPIAL4AQ9Y536 164 aa22.42■■□□□ 1.18
MSX1-201ENST00000382723 A0A0B4J293 547 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 FUOMA2VDF0 154 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 H7C1Q1 480 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 LGALS8O00214 317 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 COL8A2P25067 703 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 TATDN3Q17R31 274 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 NECAP2Q9NVZ3 263 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 SLC2A8Q9NY64 477 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 MAB21L2Q9Y586 359 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 TRBV6-6A0A0A6YYG2 114 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 CADM3Q8N126 398 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 ARRDC1Q8N5I2 433 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 OR13C8Q8NGS7 320 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 COQ2Q96H96 371 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 KIF25Q9UIL4 384 aa22.41■■□□□ 1.18
MSX1-201ENST00000382723 TRAV38-1A0A0B4J264 116 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 A0A1B0GW55 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 TMEM30CPA0ZSE6 113 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 TRDCB7Z8K6 153 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 PFDN1O60925 122 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 LY6HO94772 140 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 SCTP09683 121 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L2P0CJ85 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L3P0CJ86 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L4P0CJ87 422 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L5P0CJ88 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L6P0CJ89 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L7P0CJ90 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 SELLP14151 372 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 PLA2G2AP14555 144 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 BCAP31P51572 246 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 EDDM3AQ14507 147 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 SRSF7Q16629 238 aaKnown RBP eCLIP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms