RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 SFXN3Q9BWM7 321 aa16.34■□□□□ 0.21
GMDS-201ENST00000380805 TLNRD1Q9H1K6 362 aa16.34■□□□□ 0.21
GMDS-201ENST00000380805 HES4Q9HCC6 221 aa16.34■□□□□ 0.21
GMDS-201ENST00000380805 SLC2A9Q9NRM0 540 aa16.34■□□□□ 0.21
GMDS-201ENST00000380805 PRR13Q9NZ81 148 aa16.34■□□□□ 0.21
GMDS-201ENST00000380805 SPENQ96T58 3664 aaKnown RBP16.34■□□□□ 0.21
GMDS-201ENST00000380805 TRDCB7Z8K6 153 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 BCL2L11O43521 198 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 TUSC2O75896 110 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 AADACP22760 399 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 MDH2P40926 338 aaKnown RBP16.33■□□□□ 0.21
GMDS-201ENST00000380805 KCNJ3P48549 501 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 OR8G1Q15617 311 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 IGSF11Q5DX21 431 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 TIMM23BQ5SRD1 257 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 FAM180AQ6UWF9 173 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 NBEAQ8NFP9 2946 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 RTN4IP1Q8WWV3 396 aaPredicted RBP16.33■□□□□ 0.21
GMDS-201ENST00000380805 TOMM40LQ969M1 308 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 OR10C1Q96KK4 312 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 RNF126Q9BV68 326 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 SUCNR1Q9BXA5 334 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 TMEM100Q9NV29 134 aa16.33■□□□□ 0.21
GMDS-201ENST00000380805 BOD1L1Q8NFC6 3051 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 USP24Q9UPU5 2620 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 ITPR1Q14643 2758 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 TEX13DA0A0J9YY54 714 aaPredicted RBP16.33■□□□□ 0.2
GMDS-201ENST00000380805 MPTX1A8MV57 137 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 LEUTXA8MZ59 168 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 MLNRO43193 412 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 DUSP1P28562 367 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 RAB14P61106 215 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 HERV-K104P61576 105 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 UBA52P62987 128 aaKnown RBP16.33■□□□□ 0.2
GMDS-201ENST00000380805 TMEM187Q14656 261 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 HERPUD1Q15011 391 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 TBR1Q16650 682 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 SPIN3Q5JUX0 258 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 C6orf183Q5T699 404 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 ZNF474Q6S9Z5 364 aaPredicted RBP16.33■□□□□ 0.2
GMDS-201ENST00000380805 FAM185AQ8N0U4 392 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 C1QTNF6Q9BXI9 259 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 KCNIP3Q9Y2W7 256 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 PKD1L2Q7Z442 2459 aa16.33■□□□□ 0.2
GMDS-201ENST00000380805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.32■□□□□ 0.2
GMDS-201ENST00000380805 TDGF1P3P51864 188 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 ABCA11PQ4W5N1 156 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 PRSS54Q6PEW0 395 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 CCDC71LQ8N9Z2 235 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 SYT3Q9BQG1 590 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 PRORYQ9H606 182 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 METTL8Q9H825 291 aaKnown RBP16.32■□□□□ 0.2
GMDS-201ENST00000380805 TMEM165Q9HC07 324 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 RASL12Q9NYN1 266 aa16.32■□□□□ 0.2
GMDS-201ENST00000380805 H0YIZ8 118 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 ZNF205O95201 554 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 TK1P04183 234 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 SCTP09683 121 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 FXYD4P59646 89 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 RND3P61587 244 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 IGFBP7Q16270 282 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 ZNF718Q3SXZ3 478 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 ESCO2Q56NI9 601 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 LDLRAD3Q86YD5 345 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 SPERTQ8NA61 448 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 NEK7Q8TDX7 302 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 ABHD17AQ96GS6 310 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 CABLES2Q9BTV7 478 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 MEMO1Q9Y316 297 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 BSNQ9UPA5 3926 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 IGKV1-6A0A0C4DH72 117 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 KANTRA0A1W2PQU2 76 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 NPIPB11E5RHQ5 1161 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 H0YL77 283 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 H7C1Q1 480 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 CDIPTO14735 213 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 DEGS1O15121 323 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 NAAAQ02083 359 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 MOB1BQ7L9L4 216 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 C11orf53Q8IXP5 236 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 INO80EQ8NBZ0 244 aaPredicted RBP16.31■□□□□ 0.2
GMDS-201ENST00000380805 OR4A4PQ8NGN8 299 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 CXXC4Q9H2H0 198 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 MED9Q9NWA0 146 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 TUBD1Q9UJT1 453 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 PCDHB10Q9UN67 800 aa16.31■□□□□ 0.2
GMDS-201ENST00000380805 SLC33A1O00400 549 aaPredicted RBP16.3■□□□□ 0.2
GMDS-201ENST00000380805 DIRAS3O95661 229 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 HOXB5P09067 269 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 PET100P0DJ07 73 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 AP2S1P53680 142 aaPredicted RBP16.3■□□□□ 0.2
GMDS-201ENST00000380805 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 C20orf204Q6ZNR8 217 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 LIAT1Q6ZQX7 453 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 ST8SIA2Q92186 375 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 RDH5Q92781 318 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 MSI2Q96DH6 328 aaKnown RBP16.3■□□□□ 0.2
GMDS-201ENST00000380805 TINAGQ9UJW2 476 aa16.3■□□□□ 0.2
GMDS-201ENST00000380805 TP53TG5Q9Y2B4 290 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms