RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 C19orf12Q9NSK7 152 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 RNF222A6NCQ9 220 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 IGHG3P01860 377 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 CRHP06850 196 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 DHRS7BQ6IAN0 325 aaPredicted RBP12.74□□□□□ -0.37
PRNP-201ENST00000379440 SLC22A25Q6T423 547 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 IGFL2Q6UWQ7 119 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 ETV3LQ6ZN32 361 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 LDLRAD3Q86YD5 345 aa12.74□□□□□ -0.37
PRNP-201ENST00000379440 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
PRNP-201ENST00000379440 C14orf166Q9Y224 244 aaKnown RBP12.74□□□□□ -0.37
PRNP-201ENST00000379440 PTPRBP23467 1997 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 FUT3P21217 361 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 SURF2Q15527 256 aaPredicted RBP12.73□□□□□ -0.37
PRNP-201ENST00000379440 SVBPQ8N300 66 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 OR10J5Q8NHC4 309 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 THAP6Q8TBB0 222 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 DMRTA2Q96SC8 542 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 NECAP2Q9NVZ3 263 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 CLCF1Q9UBD9 225 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 SYNGR1O43759 233 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 LYZL6O75951 148 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 IGHV1-2P23083 117 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 PSMB6P28072 239 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 OR2T2Q6IF00 324 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 CBLN2Q8IUK8 224 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 KCNRGQ8N5I3 272 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 PRSS33Q8NF86 280 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 MRPL37Q9BZE1 423 aaKnown RBP12.73□□□□□ -0.37
PRNP-201ENST00000379440 METTL8Q9H825 291 aaKnown RBP12.73□□□□□ -0.37
PRNP-201ENST00000379440 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
PRNP-201ENST00000379440 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
PRNP-201ENST00000379440 A0A0D9SG52 128 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 HOXB5P09067 269 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 DUSP1P28562 367 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 RXFP4Q8TDU9 374 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 NANOS1Q8WY41 292 aaKnown RBP12.72□□□□□ -0.37
PRNP-201ENST00000379440 ZNF488Q96MN9 340 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 HIST1H2AAQ96QV6 131 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 GP6Q9HCN6 339 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 RAB18Q9NP72 206 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 ZFP57Q9NU63 452 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 ZNF292O60281 2723 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 FXYD4P59646 89 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 FABP9Q0Z7S8 132 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 DHRS11Q6UWP2 260 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 Q8NFD4 153 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 GGACTQ9BVM4 153 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 NMES1Q9C002 83 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 TMPRSS5Q9H3S3 457 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 METTL1Q9UBP6 276 aaKnown RBP12.72□□□□□ -0.37
PRNP-201ENST00000379440 TP53TG5Q9Y2B4 290 aa12.72□□□□□ -0.37
PRNP-201ENST00000379440 TRAV17A0A0B4J275 112 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 A0A0B4J2A0 478 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 H0YIZ8 118 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 HSPB6O14558 160 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 OR2F2O95006 317 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 SLC34A2O95436 690 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 OR2F1Q13607 317 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 ACOT7LQ6ZUV0 252 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 OR5A2Q8NGI9 324 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 OR5P3Q8WZ94 311 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 RNF126Q9BV68 326 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 DECR2Q9NUI1 292 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 SHPKQ9UHJ6 478 aa12.71□□□□□ -0.37
PRNP-201ENST00000379440 ZFHX2Q9C0A1 2572 aaPredicted RBP12.71□□□□□ -0.37
PRNP-201ENST00000379440 ANKRD30BLA7E2S9 258 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.38
PRNP-201ENST00000379440 CA6P23280 308 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 FCGR2CP31995 323 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 FGF12P61328 243 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 PUSL1Q8N0Z8 303 aaKnown RBP12.71□□□□□ -0.38
PRNP-201ENST00000379440 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.38
PRNP-201ENST00000379440 EXTL1Q92935 676 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.38
PRNP-201ENST00000379440 RIF1Q5UIP0 2472 aaKnown RBP12.71□□□□□ -0.38
PRNP-201ENST00000379440 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 KANTRA0A1W2PQU2 76 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 MEX3AA1L020 520 aaKnown RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 IFNA2P01563 188 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 ZNF14P17017 642 aaPredicted RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 IDH3GP51553 393 aaPredicted RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 ZNF345Q14585 488 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 DCUN1D4Q92564 292 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 MISP3Q96FF7 219 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 GFOD1Q9NXC2 390 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 PRR33A8MZF0 331 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 TRAPPC2LH3BP13 241 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms