RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SSSCA1O60232 199 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 SFT2D2O95562 160 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 CLEC12BQ2HXU8 276 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 MOB1BQ7L9L4 216 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF552Q9H707 407 aaPredicted RBP12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 TAF9BQ9HBM6 251 aa12.31□□□□□ -0.44
SHROOM1-203ENST00000378679 HEXAP06865 529 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 NMBP08949 121 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF273Q14593 569 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 BVESQ8NE79 360 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 OR1K1Q8NGR3 316 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 GPR137Q96N19 417 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 E5RGE8 158 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 APOA2P02652 100 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 HPNP05981 417 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 NSG2Q9Y328 171 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 ACACBO00763 2458 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 PINLYPA6NC86 204 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 LY86O95711 162 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 IGHV3-13P01766 116 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 IGHV3-7P01780 117 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 PRF1P14222 555 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 IL3RAP26951 378 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 PLAURQ03405 335 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 DCAF12L2Q5VW00 463 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 SPICQ8N5J4 248 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 OR10X1Q8NGY0 326 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 SSX3Q99909 188 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
SHROOM1-203ENST00000378679 RFPL4AA6NLU0 287 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 RFPL4AL1F8VTS6 287 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 ADAM10O14672 748 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF708P17019 499 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 CTRB1P17538 263 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 NR2C2APQ86WQ0 139 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 PIK3IP1Q96FE7 263 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 USB1Q9BQ65 265 aaKnown RBP12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 SCNM1Q9BWG6 230 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 KLK13Q9UKR3 277 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 A0A0G2JK05 382 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 MOGAT3Q86VF5 341 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 ZFP62Q8NB50 900 aaPredicted RBP12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 VCANP13611 3396 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 LRRC3CA6NJW4 275 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 JTBO76095 146 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 MT-CO2P00403 227 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 FABP1P07148 127 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 IGHV3-43DP0DP04 118 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 IAPPP10997 89 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 DHODHQ02127 395 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 HES1Q14469 280 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 CEACAM21Q3KPI0 293 aa12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF107Q9UII5 783 aaPredicted RBP12.29□□□□□ -0.44
SHROOM1-203ENST00000378679 CD3EP07766 207 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 FAM3AP98173 230 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 PHYHD1Q5SRE7 291 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 ATRAIDQ6UW56 229 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 Q6ZRG5 221 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 J3QRE1 110 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 M0R1X1 148 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 CCL21O00585 134 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 DFFBO76075 338 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 BAXQ07812 192 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 LIPGQ9Y5X9 500 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 NDUFB3O43676 98 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 RAB13P51153 203 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 NUBP1P53384 320 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 RAB18Q9NP72 206 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 OPN4Q9UHM6 478 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
SHROOM1-203ENST00000378679 Q0VFX4 171 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms