RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 C16orf87Q6PH81 154 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 GDPD1Q8N9F7 314 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 SCCPDHQ8NBX0 429 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 TMEM104Q8NE00 496 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 AQP3Q92482 292 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 ERGIC1Q969X5 290 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 PHF21AQ96BD5 680 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 CCDC32Q9BV29 185 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 RNF7Q9UBF6 113 aa11.37□□□□□ -0.59
PRPF18-202ENST00000378572 C22orf46C9J442 243 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 CTDSPLO15194 276 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 AKR7A2O43488 359 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 ADAM20O43506 726 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
PRPF18-202ENST00000378572 CRTAPO75718 401 aaPredicted RBP11.36□□□□□ -0.59
PRPF18-202ENST00000378572 GTF2F2P13984 249 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 SERPINA2P20848 420 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 CDK2P24941 298 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 GATA4P43694 442 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 HOXA4Q00056 320 aaPredicted RBP11.36□□□□□ -0.59
PRPF18-202ENST00000378572 PITPNAQ00169 270 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 MPPED2Q15777 294 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 TMEM69Q5SWH9 247 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 Q8IYB0 196 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 Q8TCH9 128 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 ATG5Q9H1Y0 275 aa11.36□□□□□ -0.59
PRPF18-202ENST00000378572 ELL3Q9HB65 397 aaPredicted RBP11.36□□□□□ -0.59
PRPF18-202ENST00000378572 A0A1W2PP11 408 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 J3QRK9 145 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 RAB27BO00194 218 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 SYNGR1O43759 233 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 HTR3BO95264 441 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 GRPP07492 148 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 SFTPBP07988 381 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 RAG2P55895 527 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 MRPS10P82664 201 aaKnown RBP11.35□□□□□ -0.59
PRPF18-202ENST00000378572 DCTN2Q13561 401 aaKnown RBP11.35□□□□□ -0.59
PRPF18-202ENST00000378572 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 METTL11BQ5VVY1 283 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 CD276Q5ZPR3 534 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 Q96M66 194 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
PRPF18-202ENST00000378572 C1orf123Q9NWV4 160 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 MTCH1Q9NZJ7 389 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A8PA6NJQ4 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 SRRM5B3KS81 715 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 LGALS8O00214 317 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 TOX4O94842 621 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 HLA-DQB1P01920 261 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 PGA5P0DJD9 388 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 NPY4RP50391 375 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OR56B1Q8NGI3 324 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OR51T1Q8NGJ9 327 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OR10Z1Q8NGY1 313 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 SELENOIQ9C0D9 397 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 BANF2Q9H503 90 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 BEX1Q9HBH7 125 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 PKD1L1Q8TDX9 2849 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 DOCK11Q5JSL3 2073 aa11.35□□□□□ -0.59
PRPF18-202ENST00000378572 TRAV38-1A0A0B4J264 116 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 FOXI3A8MTJ6 420 aaPredicted RBP11.34□□□□□ -0.59
PRPF18-202ENST00000378572 CDIPTO14735 213 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 FSTL3O95633 263 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 BCL3P20749 454 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 CFHR2P36980 270 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 TAS2R20P59543 309 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 ERVK11-1P61568 191 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 DEFA6Q01524 100 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 MIDNQ504T8 468 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 BRICD5Q6PL45 260 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 KIR3DL3Q8N743 410 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 POC1AQ8NBT0 407 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 OR10R2Q8NGX6 335 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 SLAMF9Q96A28 289 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 DACT3Q96B18 629 aaPredicted RBP11.34□□□□□ -0.59
PRPF18-202ENST00000378572 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 CTSZQ9UBR2 303 aa11.34□□□□□ -0.59
PRPF18-202ENST00000378572 A0A0A6YYD4 124 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms