RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SCTP09683 121 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 SRYQ05066 204 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 RNF212Q495C1 297 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 TMEM182Q6ZP80 229 aaPredicted RBP15.6■□□□□ 0.09
TDP2-202ENST00000378198 ZNF818PQ6ZRF7 136 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 TUSC5Q8IXB3 177 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 TAAR9Q96RI9 348 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 CLCC1Q96S66 551 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 ZNF703Q9H7S9 590 aaPredicted RBP15.6■□□□□ 0.09
TDP2-202ENST00000378198 MTCH1Q9NZJ7 389 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 ARID1AO14497 2285 aa15.6■□□□□ 0.09
TDP2-202ENST00000378198 CLEC18AA5D8T8 446 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 ZNF732B4DXR9 585 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 K7N7A8 449 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 TUSC2O75896 110 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 C1QL1O75973 258 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 HLA-HP01893 362 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 CLDN18P56856 261 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 AWAT1Q58HT5 328 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 C9orf135Q5VTT2 229 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 CLEC18CQ8NCF0 446 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 OR5A2Q8NGI9 324 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 C2CD4CQ8TF44 421 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 CALHM2Q9HA72 323 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 ATP23Q9Y6H3 246 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 IGSF23A1L1A6 192 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 C7orf77A4D0Y5 90 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 SLC22A20A6NK97 555 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 SS18L1O75177 396 aaPredicted RBP15.59■□□□□ 0.09
TDP2-202ENST00000378198 MMP9P14780 707 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 UCP1P25874 307 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 POLR2GP62487 172 aaKnown RBP eCLIP15.59■□□□□ 0.09
TDP2-202ENST00000378198 VAMP2P63027 116 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 ETV3LQ6ZN32 361 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 ZFP82Q8N141 532 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 GAPTQ8N292 157 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 RIMS4Q9H426 269 aaPredicted RBP15.59■□□□□ 0.09
TDP2-202ENST00000378198 SMDT1Q9H4I9 107 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 LYRM2Q9NU23 88 aaPredicted RBP15.59■□□□□ 0.09
TDP2-202ENST00000378198 COA4Q9NYJ1 87 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 CNTRLQ7Z7A1 2325 aa15.59■□□□□ 0.09
TDP2-202ENST00000378198 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 UMAD1C9J7I0 102 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 NEURL1O76050 574 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 SNRNP70P08621 437 aaKnown RBP15.58■□□□□ 0.09
TDP2-202ENST00000378198 CCL2P13500 99 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 PTAFRP25105 342 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 ARR3P36575 388 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 HERPUD1Q15011 391 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 LINC00596Q86U02 117 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 FAM213BQ8TBF2 198 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 NEK7Q8TDX7 302 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 GTF3AQ92664 365 aaKnown RBP15.58■□□□□ 0.09
TDP2-202ENST00000378198 HIST1H2BAQ96A08 127 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 HIST1H2AAQ96QV6 131 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 PRRG4Q9BZD6 226 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 STRADBQ9C0K7 418 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 SLC35B3Q9H1N7 401 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 PLK3Q9H4B4 646 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 OPA3Q9H6K4 179 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 CRIM1Q9NZV1 1036 aa15.58■□□□□ 0.09
TDP2-202ENST00000378198 PCP4L1A6NKN8 68 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 C1orf196B1AJZ1 125 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 HSPA12AO43301 675 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 ADAM20O43506 726 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 VDAC1P21796 283 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 ASCL1P50553 236 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 TMEM252Q8N6L7 170 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 SUMF1Q8NBK3 374 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 OR8G5Q8NG78 346 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 OR2G3Q8NGZ4 309 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 IL22RA2Q969J5 263 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 HS3ST6Q96QI5 342 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 CDX2Q99626 313 aaPredicted RBP15.58■□□□□ 0.08
TDP2-202ENST00000378198 KCNJ16Q9NPI9 418 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 PRDM6Q9NQX0 595 aa15.58■□□□□ 0.08
TDP2-202ENST00000378198 IGKV1D-13A0A0B4J2D9 117 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 ZNF724A8MTY0 619 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 M0R036 132 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 MT-ND4LP03901 98 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 IGKV1-13P0DP09 117 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 ZNF44P15621 663 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 ATP6V0CP27449 155 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 HABP2Q14520 560 aaPredicted RBP15.57■□□□□ 0.08
TDP2-202ENST00000378198 NMSQ5H8A3 153 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 ABHD17BQ5VST6 288 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 CMTM1Q8IZ96 169 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 LILRB1Q8NHL6 650 aaPredicted RBP15.57■□□□□ 0.08
TDP2-202ENST00000378198 SIGLEC12Q96PQ1 595 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 DDA1Q9BW61 102 aa15.57■□□□□ 0.08
TDP2-202ENST00000378198 SSSCA1O60232 199 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 CELA3AP09093 270 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 AKR1C3P42330 323 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 FOXG1P55316 489 aaPredicted RBP15.56■□□□□ 0.08
TDP2-202ENST00000378198 RAB1AP62820 205 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 ID3Q02535 119 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 CLINT1Q14677 625 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 FREM1Q5H8C1 2179 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 C5orf24Q7Z6I8 188 aa15.56■□□□□ 0.08
TDP2-202ENST00000378198 OR5D13Q8NGL4 314 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms