RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 RPEQ96AT9 228 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 ZMIZ1Q9ULJ6 1067 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 CXorf51AA0A1B0GTR3 108 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 CDRT15L2A8MXV6 281 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 BHLHA15Q7RTS1 189 aaPredicted RBP10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 OR2M7Q8NG81 312 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 OR2T6Q8NHC8 308 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 OR2A5Q96R48 311 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 FLRT3Q9NZU0 649 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 MIA3Q5JRA6 1907 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 IGKV3OR2-268A0A0C4DH90 116 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 BCL3P20749 454 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PWWP2BQ6NUJ5 590 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 TNFAIP6P98066 277 aaPredicted RBP10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 CBLN3Q6UW01 205 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 DUXBA0A1W2PPF3 345 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 C1QCP02747 245 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 TTRP02766 147 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 ACAA1P09110 424 aaPredicted RBP10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 TNFRSF1AP19438 455 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PKIAP61925 76 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PAX5Q02548 391 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 TGIF1Q15583 401 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 IGFBP7Q16270 282 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PABPC1L2AQ5JQF8 200 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF547Q8IVP9 402 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PAPPA2Q9BXP8 1791 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 TPRP12270 2363 aaKnown RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF25P17030 456 aaPredicted RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 MDH2P40926 338 aaKnown RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 C1QL3Q5VWW1 255 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 SIGLEC5O15389 551 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 SLC25A42Q86VD7 318 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 C7orf77A4D0Y5 90 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 NPY1RP25929 384 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 ABHD14AQ9BUJ0 271 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 OPN4Q9UHM6 478 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 CRHP06850 196 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 STARD10Q9Y365 291 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 EML2O95834 649 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 PRDM14Q9GZV8 571 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 RAB33BQ9H082 229 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 ELF5Q9UKW6 265 aaPredicted RBP10.57□□□□□ -0.72
PCDHA9-201ENST00000378122 CXCL2P19875 107 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 GALNSP34059 522 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 Q8IYB0 196 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 OR8B3Q8NGG8 313 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 RFESDQ8TAC1 157 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 PCM1Q15154 2024 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 MAGEA5P43359 124 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 MPV17LQ2QL34 196 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 SLC2A9Q9NRM0 540 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 LYG1Q8N1E2 194 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 BCL2L2Q92843 193 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 FUT9Q9Y231 359 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 CCL27Q9Y4X3 112 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 LRRC3CA6NJW4 275 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 VN1R4Q7Z5H5 301 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 ASB5Q8WWX0 329 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 MYOZ1Q9NP98 299 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 FGF2P09038 288 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 JMJD6Q6NYC1 403 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 MRGPRDQ8TDS7 321 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 NEIL1Q96FI4 390 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 IL17BQ9UHF5 180 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 VSIG4Q9Y279 399 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 PDCD6O75340 191 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF770Q6IQ21 691 aaPredicted RBP10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
PCDHA9-201ENST00000378122 IGHV3OR15-7A0A075B7D8 119 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 H3BQ15 152 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 GATCO43716 136 aaKnown RBP10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 NEURL1O76050 574 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 SP1P08047 785 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms