RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 PEA15Q15121 130 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR1C1Q15619 314 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 CDCP2Q5VXM1 449 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF818PQ6ZRF7 136 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR2C3Q8N628 320 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR5P3Q8WZ94 311 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 HES7Q9BYE0 225 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 PLK3Q9H4B4 646 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 FOXJ2Q9P0K8 574 aa10.06□□□□□ -0.8
TNFRSF9-201ENST00000377507 IGKV1-6A0A0C4DH72 117 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 NGFP01138 241 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 CRYBA1P05813 215 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 JMJD7P0C870 316 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 CCNOP22674 350 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 MAGEA5P43359 124 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 RAB13P51153 203 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 RAB1AP62820 205 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ID3Q02535 119 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 GUK1Q16774 197 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 TCEAL6Q6IPX3 200 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 MEX3BQ6ZN04 569 aaKnown RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 BATF2Q8N1L9 274 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 GAPTQ8N292 157 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 LILRB1Q8NHL6 650 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SECTM1Q8WVN6 248 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 TCEAL3Q969E4 200 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 APH1AQ96BI3 265 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 AKR1E2Q96JD6 320 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 PARP12Q9H0J9 701 aaKnown RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF552Q9H707 407 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SPACA1Q9HBV2 294 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SMCO4Q9NRQ5 59 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 C19orf12Q9NSK7 152 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 IGKV1D-13A0A0B4J2D9 117 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 CD300LBA8K4G0 201 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 K7N7A8 449 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 IGKV1-13P0DP09 117 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 MMP9P14780 707 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 VDAC1P21796 283 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 NKX2-1P43699 371 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 FHITP49789 147 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 DCAF10Q5QP82 559 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 C9orf135Q5VTT2 229 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF880Q6PDB4 577 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 PCSK4Q6UW60 755 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF695Q8IW36 515 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF565Q8N9K5 539 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 RXFP4Q8TDU9 374 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 SH3BGRL3Q9H299 93 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 IFT22Q9H7X7 185 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 PLEKHF2Q9H8W4 249 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 LYRM2Q9NU23 88 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 ABI3Q9P2A4 366 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 IL36RNQ9UBH0 155 aa10.05□□□□□ -0.8
TNFRSF9-201ENST00000377507 CNTRLQ7Z7A1 2325 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 DMDP11532 3685 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR5B21A6NL26 309 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 NME2P1O60361 137 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 PITX3O75364 302 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 WNT2P09544 360 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 CAMLGP49069 296 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF266Q14584 549 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 AVPI1Q5T686 147 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 C5orf24Q7Z6I8 188 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 C15orf54Q8N8G6 183 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR5D13Q8NGL4 314 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 SAV1Q9H4B6 383 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 MPC1Q9Y5U8 109 aa10.04□□□□□ -0.8
TNFRSF9-201ENST00000377507 IGSF23A1L1A6 192 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 FAM24AA6NFZ4 105 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 FAM166BA8MTA8 275 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 H0Y980 276 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SYNGR1O43759 233 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 MPLP40238 635 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 POLR2GP62487 172 aaKnown RBP eCLIP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PLP2Q04941 152 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 IL24Q13007 206 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 TSC22D1Q15714 1073 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 LPAL2Q16609 132 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SP5Q6BEB4 398 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF573Q86YE8 665 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ODF3L1Q8IXM7 274 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SUMF2Q8NBJ7 301 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms