RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 EDDM3BP56851 147 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 MRPS10P82664 201 aaKnown RBP10.79□□□□□ -0.68
CBWD3-203ENST00000377344 AESQ08117 197 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 GDPD3Q7L5L3 318 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 OR5D13Q8NGL4 314 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 OR52I2Q8NH67 350 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 PLPPR1Q8TBJ4 325 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SETD6Q8TBK2 473 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SHARPINQ9H0F6 387 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 C12orf4Q9NQ89 552 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 SLC25A10Q9UBX3 287 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-203ENST00000377344 APCP25054 2843 aa10.79□□□□□ -0.68
CBWD3-203ENST00000377344 HECTD1Q9ULT8 2610 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 GABARAPH6UMI1 98 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 NDUFS8O00217 210 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 DVL1O14640 695 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 TNFRSF13BO14836 293 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-203ENST00000377344 MGST3O14880 152 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 LPLP06858 475 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 GIFP27352 417 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 LRRC10Q5BKY1 277 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 KRBOX4Q5JUW0 171 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 TPRX1Q8N7U7 411 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 SMIM4Q8WVI0 70 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 NINJ1Q92982 152 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 SDHCQ99643 169 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-203ENST00000377344 THAP7Q9BT49 309 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-203ENST00000377344 ST6GALNAC5Q9BVH7 336 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 IFT46Q9NQC8 304 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 MIOXQ9UGB7 285 aa10.78□□□□□ -0.68
CBWD3-203ENST00000377344 ZNF230Q9UIE0 474 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-203ENST00000377344 SSX5O60225 188 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 RBBP9O75884 186 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 KCNJ3P48549 501 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 INPP1P49441 399 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 DSCR9P59020 149 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 BAK1Q16611 211 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 TRIQKQ629K1 86 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 FGFRL1Q8N441 504 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 GVQW1Q8N7I0 195 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 OR8B3Q8NGG8 313 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 OR4K15Q8NH41 348 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 GPX8Q8TED1 209 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 C10orf105Q8TEF2 133 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 CCDC107Q8WV48 283 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 MAFIPQ8WZ33 124 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 OR8B2Q96RD0 313 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 FAM234AQ9H0X4 552 aa10.77□□□□□ -0.68
CBWD3-203ENST00000377344 POLQO75417 2590 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 MEIKINA0A087WXM9 373 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 MEX3AA1L020 520 aaKnown RBP10.77□□□□□ -0.69
CBWD3-203ENST00000377344 SULT1C2O00338 296 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.69
CBWD3-203ENST00000377344 CA11O75493 328 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 CSN2P05814 226 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 GLIPR1P48060 266 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 SHEQ5VZ18 495 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 ZNF497Q6ZNH5 498 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 LRRC75A-AS1Q8N1F1 130 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 H1FXQ92522 213 aaKnown RBP10.77□□□□□ -0.69
CBWD3-203ENST00000377344 MBD6Q96DN6 1003 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 NEIL1Q96FI4 390 aaPredicted RBP10.77□□□□□ -0.69
CBWD3-203ENST00000377344 COQ2Q96H96 371 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 CCDC32Q9BV29 185 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 KIF25Q9UIL4 384 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 TRAPPC2LQ9UL33 140 aa10.77□□□□□ -0.69
CBWD3-203ENST00000377344 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
CBWD3-203ENST00000377344 ARID1AO14497 2285 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 IGHV4-30-2A0A087WSY4 118 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 H7C1Q1 480 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 LANCL1O43813 399 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 ORC5O43913 435 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 FCGR3AP08637 254 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 CBX5P45973 191 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 Q5PR19 223 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 RSBN1Q5VWQ0 802 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-203ENST00000377344 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 MRPL30Q8TCC3 161 aaKnown RBP10.76□□□□□ -0.69
CBWD3-203ENST00000377344 RIMS4Q9H426 269 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-203ENST00000377344 PATZ1Q9HBE1 687 aaKnown RBP10.76□□□□□ -0.69
CBWD3-203ENST00000377344 CLN8Q9UBY8 286 aa10.76□□□□□ -0.69
CBWD3-203ENST00000377344 FUOMA2VDF0 154 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 NAPSAO96009 420 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 MT-ND4P03905 459 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 WNT2P09544 360 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 IL7P13232 177 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 GDNFP39905 211 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 P2RX3P56373 397 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 ACTBP60709 375 aa10.75□□□□□ -0.69
CBWD3-203ENST00000377344 SEC61A1P61619 476 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms