RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 EXOSC2Q13868 293 aaKnown RBP14.25□□□□□ -0.13
HLA-A-202ENST00000376806 KIR2DS1Q14954 304 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 RGS7BPQ6MZT1 257 aaPredicted RBP14.25□□□□□ -0.13
HLA-A-202ENST00000376806 C11orf87Q6NUJ2 197 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 TMEM65Q6PI78 240 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 GFRALQ6UXV0 394 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 POC1AQ8NBT0 407 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 PIK3IP1Q96FE7 263 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 CNTNAP3BQ96NU0 1288 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 CNTNAP3Q9BZ76 1288 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 NMES1Q9C002 83 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 RDH8Q9NYR8 311 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 TEX13DA0A0J9YY54 714 aaPredicted RBP14.25□□□□□ -0.13
HLA-A-202ENST00000376806 TRDCB7Z8K6 153 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 PPYP01298 95 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 IFNA7P01567 189 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 FAM87AP0C7U9 286 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 ABCA11PQ4W5N1 156 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 PRR30Q53SZ7 412 aaPredicted RBP14.25□□□□□ -0.13
HLA-A-202ENST00000376806 ALKBH2Q6NS38 261 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 SLC38A6Q8IZM9 456 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 MUCL1Q96DR8 90 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 MFFQ9GZY8 342 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 ARL6Q9H0F7 186 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 TLNRD1Q9H1K6 362 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 PIGMQ9H3S5 423 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 PRORYQ9H606 182 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 C1orf123Q9NWV4 160 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 ATP23Q9Y6H3 246 aa14.25□□□□□ -0.13
HLA-A-202ENST00000376806 A0A0G2JNJ9 132 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 A8MXE2 369 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 SIRPB1O00241 398 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 OR2H2O95918 312 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 CFDP00746 253 aaPredicted RBP14.24□□□□□ -0.13
HLA-A-202ENST00000376806 ACAA1P09110 424 aaPredicted RBP14.24□□□□□ -0.13
HLA-A-202ENST00000376806 SCTP09683 121 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 MDH2P40926 338 aaKnown RBP14.24□□□□□ -0.13
HLA-A-202ENST00000376806 HERPUD1Q15011 391 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 PAN3Q58A45 887 aaKnown RBP14.24□□□□□ -0.13
HLA-A-202ENST00000376806 SPIN3Q5JUX0 258 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF880Q6PDB4 577 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 C5orf24Q7Z6I8 188 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 OR5T2Q8NGG2 359 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 NAA60Q9H7X0 242 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 HES4Q9HCC6 221 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 MSL2Q9HCI7 577 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 Q9UFV3 132 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 TNFSF18Q9UNG2 199 aa14.24□□□□□ -0.13
HLA-A-202ENST00000376806 A0A1B0GWJ7 208 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 SLC33A1O00400 549 aaPredicted RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 RP2O75695 350 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 CYCSP99999 105 aaKnown RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF146Q15072 292 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 PRAMEF6Q5VXH4 476 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 MRGPRGQ86SM5 289 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 C11orf53Q8IXP5 236 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 SNRNP40Q96DI7 357 aaKnown RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 RSRP1Q9BUV0 290 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 SLC2A9Q9NRM0 540 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF835Q9Y2P0 537 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 ERVH48-1M5A8F1 160 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 BET1O15155 118 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 CRYAAP02489 173 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 TK1P04183 234 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 S100A1P23297 94 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 MSMPQ1L6U9 139 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 PHLDA2Q53GA4 152 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 SHEQ5VZ18 495 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 FIP1L1Q6UN15 594 aaKnown RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 THAP6Q8TBB0 222 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 RTN4IP1Q8WWV3 396 aaPredicted RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 METTL8Q9H825 291 aaKnown RBP14.23□□□□□ -0.13
HLA-A-202ENST00000376806 TMEM165Q9HC07 324 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 UBQLN2Q9UHD9 624 aa14.23□□□□□ -0.13
HLA-A-202ENST00000376806 IGKV1-6A0A0C4DH72 117 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 A6NLC8 198 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 DIRAS3O95661 229 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 CTXN2P0C2S0 81 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 CCKARP32238 428 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 FAM27E3Q08E93 113 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF345Q14585 488 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 ATXN7L3Q14CW9 347 aaPredicted RBP14.22□□□□□ -0.13
HLA-A-202ENST00000376806 C1QTNF12Q5T7M4 302 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 ZNF826PQ6ZT77 177 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 PLPPR1Q8TBJ4 325 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 GALNT14Q96FL9 552 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 ASF1BQ9NVP2 202 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 TREM2Q9NZC2 230 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 MBD2Q9UBB5 411 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 SPEF1Q9Y4P9 236 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 MAB21L2Q9Y586 359 aa14.22□□□□□ -0.13
HLA-A-202ENST00000376806 SH2D1BO14796 132 aa14.21□□□□□ -0.13
HLA-A-202ENST00000376806 HOXB5P09067 269 aa14.21□□□□□ -0.13
HLA-A-202ENST00000376806 PSMB6P28072 239 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms