RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 J3QT63 122 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 K7EPK0 472 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 SLC34A2O95436 690 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 HOXD4P09016 255 aaPredicted RBP17.25■□□□□ 0.35
VSX1-202ENST00000376709 ERVS71-1P61550 626 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 RTP5Q14D33 572 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 IGFBP7Q16270 282 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 GABRA6Q16445 453 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 SPIN3Q5JUX0 258 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 FAM71E2Q8N5Q1 922 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 SECTM1Q8WVN6 248 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 TMED6Q8WW62 240 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 RIMS4Q9H426 269 aaPredicted RBP17.25■□□□□ 0.35
VSX1-202ENST00000376709 FBXO9Q9UK97 447 aaPredicted RBP17.25■□□□□ 0.35
VSX1-202ENST00000376709 ATP23Q9Y6H3 246 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 TRDCB7Z8K6 153 aa17.24■□□□□ 0.35
VSX1-202ENST00000376709 HKR1P10072 659 aa17.24■□□□□ 0.35
VSX1-202ENST00000376709 IL13RA2Q14627 380 aa17.24■□□□□ 0.35
VSX1-202ENST00000376709 GUSBP1Q15486 140 aa17.24■□□□□ 0.35
VSX1-202ENST00000376709 INO80CQ6PI98 192 aaPredicted RBP17.24■□□□□ 0.35
VSX1-202ENST00000376709 ZNF565Q8N9K5 539 aa17.24■□□□□ 0.35
VSX1-202ENST00000376709 BOLLQ8N9W6 283 aaKnown RBP17.24■□□□□ 0.35
VSX1-202ENST00000376709 MSI2Q96DH6 328 aaKnown RBP17.24■□□□□ 0.35
VSX1-202ENST00000376709 RPL12P30050 165 aaKnown RBP17.23■□□□□ 0.35
VSX1-202ENST00000376709 GNRHRP30968 328 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 MEX3BQ6ZN04 569 aaKnown RBP17.23■□□□□ 0.35
VSX1-202ENST00000376709 FAM185AQ8N0U4 392 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 C18orf12Q96KH6 178 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 TP53RKQ96S44 253 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 TRAV24A0A0B4J272 114 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 C3orf85A0A1B0GTC6 90 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 C3orf80F5H4A9 247 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 SIGLEC5O15389 551 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 MPPED1O15442 326 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 ZNF44P15621 663 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 HERPUD1Q15011 391 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 VWA1Q6PCB0 445 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 SPERTQ8NA61 448 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 C9orf106Q8NAJ2 232 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 OR1J1Q8NGS3 322 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 SLC25A40Q8TBP6 338 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 RNF141Q8WVD5 230 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 GTF3AQ92664 365 aaKnown RBP17.23■□□□□ 0.35
VSX1-202ENST00000376709 ADAT1Q9BUB4 502 aaKnown RBP17.23■□□□□ 0.35
VSX1-202ENST00000376709 ASF1BQ9NVP2 202 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 PCDHB10Q9UN67 800 aa17.23■□□□□ 0.35
VSX1-202ENST00000376709 TAAR5O14804 337 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 CEACAM4O75871 244 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 CNOT4O95628 575 aaKnown RBP17.22■□□□□ 0.35
VSX1-202ENST00000376709 CTXN2P0C2S0 81 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 KIR2DL2P43627 348 aaPredicted RBP17.22■□□□□ 0.35
VSX1-202ENST00000376709 OR2A2Q6IF42 318 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 OR1S2Q8NGQ3 325 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 MRPL30Q8TCC3 161 aaKnown RBP17.22■□□□□ 0.35
VSX1-202ENST00000376709 WNT2BQ93097 391 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 LRP5LA4QPB2 252 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 H7C1Q1 480 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 DEGS1O15121 323 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 MBPP02686 304 aaPredicted RBP17.22■□□□□ 0.35
VSX1-202ENST00000376709 UCP2P55851 309 aa17.22■□□□□ 0.35
VSX1-202ENST00000376709 RAC2P15153 192 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 EIF5AP63241 154 aaKnown RBP17.21■□□□□ 0.35
VSX1-202ENST00000376709 SRPXP78539 464 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 BTN1A1Q13410 526 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 TMEM268Q5VZI3 342 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 C20orf204Q6ZNR8 217 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 ASCL5Q7RTU5 278 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 WDR86Q86TI4 376 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 TBC1D26Q86UD7 250 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 SLC35G3Q8N808 338 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 SCCPDHQ8NBX0 429 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 LHFPL5Q8TAF8 219 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 RHOFQ9HBH0 211 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 POLDIP2Q9Y2S7 368 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 TMED3Q9Y3Q3 217 aa17.21■□□□□ 0.35
VSX1-202ENST00000376709 DSPP15924 2871 aaKnown RBP17.21■□□□□ 0.35
VSX1-202ENST00000376709 FGF16O43320 207 aa17.21■□□□□ 0.34
VSX1-202ENST00000376709 ZNF818PQ6ZRF7 136 aa17.21■□□□□ 0.34
VSX1-202ENST00000376709 PIGMQ9H3S5 423 aa17.21■□□□□ 0.34
VSX1-202ENST00000376709 MGAQ8IWI9 3026 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 CACNA1GO43497 2377 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 IGKV1-6A0A0C4DH72 117 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 E5RGE8 158 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 GPR31O00270 319 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 GLAP06280 429 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 ALKBH6Q3KRA9 238 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 FAM76BQ5HYJ3 339 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 RPL7L1Q6DKI1 246 aaKnown RBP17.2■□□□□ 0.34
VSX1-202ENST00000376709 Q8IYB0 196 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 GAPTQ8N292 157 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 ZADH2Q8N4Q0 377 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 TMEM222Q9H0R3 208 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 TAF9BQ9HBM6 251 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 ZFP57Q9NU63 452 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 NSG2Q9Y328 171 aa17.2■□□□□ 0.34
VSX1-202ENST00000376709 UBE2J1Q9Y385 318 aaPredicted RBP17.2■□□□□ 0.34
VSX1-202ENST00000376709 AGFG2O95081 481 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 APOC3P02656 99 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 HOXB1P14653 301 aaPredicted RBP17.19■□□□□ 0.34
VSX1-202ENST00000376709 COX5AP20674 150 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms