RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 A0A1W2PRX2 142 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 IRGMA1A4Y4 181 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 RAB3AP20336 220 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 MTNR1BP49286 362 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 PRRX1P54821 245 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 RBM39Q14498 530 aaKnown RBP16.83■□□□□ 0.28
VSX1-201ENST00000376707 CDK5R1Q15078 307 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 HLA-DRB5Q30154 266 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 FBLN7Q53RD9 439 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 XAF1Q6GPH4 301 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 CENPVQ7Z7K6 275 aaPredicted RBP16.83■□□□□ 0.28
VSX1-201ENST00000376707 PACRGLQ8N7B6 248 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 SLC25A33Q9BSK2 321 aa16.83■□□□□ 0.28
VSX1-201ENST00000376707 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
VSX1-201ENST00000376707 DIMT1Q9UNQ2 313 aaKnown RBP16.83■□□□□ 0.28
VSX1-201ENST00000376707 PLXNB1O43157 2135 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 ZNF729A6NN14 1252 aaPredicted RBP16.82■□□□□ 0.28
VSX1-201ENST00000376707 BUB1B-PAK6H3BSN5 160 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 HSPB6O14558 160 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 OR2F2O95006 317 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 CLIC3O95833 236 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 OR3A4PP47883 348 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 TTC23Q5W5X9 447 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 TMPRSS11AQ6ZMR5 421 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 Q8NFD4 153 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 CNIH3Q8TBE1 160 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 GPR148Q8TDV2 347 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 SGCDQ92629 289 aa16.82■□□□□ 0.28
VSX1-201ENST00000376707 NR1H4Q96RI1 486 aaPredicted RBP16.82■□□□□ 0.28
VSX1-201ENST00000376707 PPIL3Q9H2H8 161 aaKnown RBP16.82■□□□□ 0.28
VSX1-201ENST00000376707 H0YJX3 145 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 MAGEB3O15480 346 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 CD2P06729 351 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 LPLP06858 475 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 NFYBP25208 207 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 MNDAP41218 407 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 GLP1RP43220 463 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 CD83Q01151 205 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 C17orf58Q2M2W7 97 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 PAN3Q58A45 887 aaKnown RBP16.81■□□□□ 0.28
VSX1-201ENST00000376707 OR2G6Q5TZ20 316 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 CCDC144NLQ6NUI1 221 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 ASCL4Q6XD76 172 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 Q6ZPA2 131 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 OR51A2Q8NGJ7 313 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 RBM14Q96PK6 669 aaKnown RBP16.81■□□□□ 0.28
VSX1-201ENST00000376707 GPER1Q99527 375 aa16.81■□□□□ 0.28
VSX1-201ENST00000376707 A0A087X0M5 115 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 KBTBD11-OT1A0A1B0GTJ5 212 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 A0A1B0GX30 115 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 OOSP1A8MZH6 123 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 GABRPO00591 440 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 PIN1P1O15428 100 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 OGG1O15527 345 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 PF4V1P10720 104 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 SOX2P48431 317 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 ADARB1P78563 741 aaKnown RBP16.8■□□□□ 0.28
VSX1-201ENST00000376707 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 SATL1Q86VE3 508 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 ZNF565Q8N9K5 539 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 SETD9Q8NE22 299 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 OR51T1Q8NGJ9 327 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 OR9G1Q8NH87 305 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 CYGBQ8WWM9 190 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 SMIM19Q96E16 107 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 NECAP2Q9NVZ3 263 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 BABAM2Q9NXR7 383 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 TAS2R4Q9NYW5 299 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 KIF25Q9UIL4 384 aa16.8■□□□□ 0.28
VSX1-201ENST00000376707 EXOSC1Q9Y3B2 195 aaKnown RBP16.8■□□□□ 0.28
VSX1-201ENST00000376707 SIRT4Q9Y6E7 314 aaPredicted RBP16.8■□□□□ 0.28
VSX1-201ENST00000376707 MEIKINA0A087WXM9 373 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 TCRBV4S1A1TA0A5B7 111 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 LY6LH3BQJ8 138 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 MYL12AP19105 171 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 CD33P20138 364 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 MRAPQ8TCY5 172 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 TNFAIP8L1Q8WVP5 186 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 TMEM106AQ96A25 262 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 PHF21AQ96BD5 680 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 KIRREL1Q96J84 757 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 BARHL1Q9BZE3 327 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 FAM192AQ9GZU8 254 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 NCOR1P1Q9H4R4 102 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 CALYQ9NYX4 217 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 ZNF281Q9Y2X9 895 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 HSPE1-MOB4S4R3N1 261 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 KIAA2026Q5HYC2 2103 aa16.79■□□□□ 0.28
VSX1-201ENST00000376707 M0QZK8 103 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 C21orf33P30042 268 aaPredicted RBP16.78■□□□□ 0.28
VSX1-201ENST00000376707 PAX5Q02548 391 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 IL13RA2Q14627 380 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 RSU1Q15404 277 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 C9orf152Q5JTZ5 239 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 UTF1Q5T230 341 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 DHRSXQ8N5I4 330 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 ZNF485Q8NCK3 441 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 OR4X2Q8NGF9 303 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms