RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OBP2BQ9NPH6 170 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 EML5Q05BV3 1969 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CACNA1BQ00975 2339 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 IFI6P09912 130 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FABP4P15090 132 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 EPHA8P29322 1005 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF816Q0VGE8 651 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PRDX4Q13162 271 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FAM131CQ96AQ9 280 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HES7Q9BYE0 225 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FZR1Q9UM11 496 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NXPH2O95156 264 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF17P17021 662 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LSM6P62312 80 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CCL20P78556 96 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF528Q3MIS6 628 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 A0A087WZY1 265 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DEGS1O15121 323 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 IL2RGP31785 369 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FUT6P51993 359 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RAB35Q15286 201 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF880Q6PDB4 577 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FGFBP3Q8TAT2 258 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NGFP01138 241 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FAM157CP0CG43 387 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LIFP15018 202 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RAC1P63000 192 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 QRFPP83859 136 aa12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RBFOX3A6NFN3 312 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 NUDT19A8MXV4 375 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 H3BQ15 152 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SRSF10O75494 262 aaKnown RBP12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGHMP01871 453 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DEFA6Q01524 100 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TLE4Q04727 773 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DHRS7BQ6IAN0 325 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PARP11Q9NR21 331 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GPR27Q9NS67 375 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 UBE2L5PA0A1B0GUS4 154 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CRYM-AS1A6NIL9 109 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZNF787Q6DD87 383 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 VHLLQ6RSH7 139 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZNF441Q8N8Z8 693 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OR2V1Q8NHB1 315 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 Q96M66 194 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TOLLIPQ9H0E2 274 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OPA3Q9H6K4 179 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 WFDC1Q9HC57 220 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 MYOZ1Q9NP98 299 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 WASF3Q9UPY6 502 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HS3ST3B1Q9Y662 390 aa12.46□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PHOX2AO14813 284 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PRF1P14222 555 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HOXC12P31275 282 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 UBE2G2P60604 165 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DLK1P80370 383 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 EXT1Q16394 746 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 FAM209BQ5JX69 171 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 LHX4Q969G2 390 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ABI3Q9P2A4 366 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 B4GALT7Q9UBV7 327 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 A0A1W2PPQ1 181 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SYNGR1O43759 233 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TGFBR3Q03167 851 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 BAXQ07812 192 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HMGN3Q15651 99 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ACER2Q5QJU3 275 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM164Q5U3C3 297 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TPRX1Q8N7U7 411 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CCDC54Q8NEL0 328 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PLEKHF2Q9H8W4 249 aa12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CHCHD2Q9Y6H1 151 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 FGF16O43320 207 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IFNA4P05014 189 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ECI1P42126 302 aa12.44□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GABRA2P47869 451 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms