RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 DXOO77932 396 aaKnown RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 GAB4Q2WGN9 574 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 DEGS2Q6QHC5 323 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 TOMM20LQ6UXN7 152 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 TUSC5Q8IXB3 177 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 CYB561D1Q8N8Q1 229 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 SP7Q8TDD2 431 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MEGF10Q96KG7 1140 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 SLC35D1Q9NTN3 355 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MDC1Q14676 2089 aaKnown RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 NKX6-3A6NJ46 265 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF17P17021 662 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 HIKESHIQ53FT3 197 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 GLRX5Q86SX6 157 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 RIMS4Q9H426 269 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 SVILO95425 2214 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 TOX4O94842 621 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 OPN1MWP04001 364 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 FGF2P09038 288 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 OPN1MW2P0DN77 364 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 OPN1MW3P0DN78 364 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MMP9P14780 707 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 HLA-DRB3P79483 266 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 WDR74Q6RFH5 385 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 C16orf82Q7Z2V1 217 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 SAT2Q96F10 170 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 CHST5Q9GZS9 411 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 LPAR5Q9H1C0 372 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ARRDC1-AS1Q9H2J1 176 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MPDZO75970 2070 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 IGKV1D-43A0A0B4J1Z2 117 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 OR7C2O60412 319 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 PMELP40967 661 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 P2RY4P51582 365 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 OR2Z1Q8NG97 314 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MUCL1Q96DR8 90 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 KCNK17Q96T54 332 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 FANCMQ8IYD8 2048 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 FCGR3BO75015 233 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 LINC00518Q8N0U6 118 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 CT55Q8WUE5 264 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 DYNLRB1Q9NP97 96 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 RCC2Q9P258 522 aaKnown RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 WNT16Q9UBV4 365 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF98A6NK75 572 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 YKT6O15498 198 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 LYZL6O75951 148 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 SNCAP37840 140 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 FAM209BQ5JX69 171 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 OR10X1Q8NGY0 326 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 POLDIP2Q9Y2S7 368 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 KIF26AQ9ULI4 1882 aaPredicted RBP5.71□□□□□ -1.49
SMC1A-202ENST00000375340 BTBD17A6NE02 478 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 TNFSF15O95150 251 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 PPYP01298 95 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 UNC119Q13432 240 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 CADM4Q8NFZ8 388 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 RFESDQ8TAC1 157 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 MRGPRFQ96AM1 343 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM38BQ9NVV0 291 aa5.71□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM30CPA0ZSE6 113 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 GLULP15104 373 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 MAGEA5P43359 124 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.71□□□□□ -1.5
SMC1A-202ENST00000375340 APCDD1LQ8NCL9 501 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TAAR3PQ9P1P4 343 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TICRRQ7Z2Z1 1910 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 SPRY3O43610 288 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM241Q24JQ0 296 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 RTN4RL2Q86UN3 420 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 OR10G4Q8NGN3 311 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 OR10G9Q8NGN4 311 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 OR10G7Q8NGN6 311 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CTHRC1Q96CG8 243 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 IGHV3OR15-7A0A075B7D8 119 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF92Q03936 586 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 LRRC75AQ8NAA5 344 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 IL22RA2Q969J5 263 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 GNB4Q9HAV0 340 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CXorf65A6NEN9 183 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 GABRA4P48169 554 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 RHBDD2Q6NTF9 364 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 GPR87Q9BY21 358 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 SRXN1Q9BYN0 137 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 ARL2-SNX15V9GYD0 113 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 DENND4CQ5VZ89 1909 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 OR2A4O95047 310 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 IGHMP01871 453 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 MBP02144 154 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CST2P09228 141 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 SMIM6P0DI80 62 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CCL4P13236 92 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 LIFP15018 202 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 STPG1Q5TH74 334 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF880Q6PDB4 577 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 OR2A7Q96R45 310 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 LRFN3Q9BTN0 628 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms