RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 HSPB2Q16082 182 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 TMEM116Q8NCL8 245 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 OR4D11Q8NGI4 311 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 C19orf43Q9BQ61 176 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 ANGPTL6Q8NI99 470 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 PNPP00491 289 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 ACP1P24666 158 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 RAB7AP51149 207 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 ADAD2Q8NCV1 583 aaKnown RBP12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC25A40Q8TBP6 338 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 SPINT1O43278 529 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 VSIG10L2P0DP72 767 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 PMELP40967 661 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 MRPL54Q6P161 138 aaKnown RBP12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 GAPTQ8N292 157 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 FAM222BQ8WU58 562 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 M0R2Z0 102 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 IL11P20809 199 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 TRA2AQ13595 282 aaKnown RBP eCLIP12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 LINC01560Q8TB33 94 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 ADAMTS17Q8TE56 1095 aa12.95□□□□□ -0.34
NOTCH4-201ENST00000375023 AKAP11Q9UKA4 1901 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SEMA7AO75326 666 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 PDCD6O75340 191 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 NDUFB6O95139 128 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SRD5A2P31213 254 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC23A3Q6PIS1 610 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 RNF165Q6ZSG1 346 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 TOLLIPQ9H0E2 274 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 CCL28Q9NRJ3 127 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 CYSLTR2Q9NS75 346 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 MRM2Q9UI43 246 aaKnown RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC25A1P53007 311 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 LOXL3P58215 753 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SCN1AP35498 2009 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 CHST1O43916 411 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 FRRS1LQ9P0K9 344 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 INSIG2Q9Y5U4 225 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 LANCL1O43813 399 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SP9P0CG40 484 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 KCNJ3P48549 501 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 SULT1A2P50226 295 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 CCL8P80075 99 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 TECRQ9NZ01 308 aaKnown RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 C5orf52A6NGY3 159 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 GSTZ1O43708 216 aaPredicted RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 ZFP36L2P47974 494 aaKnown RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 LIAT1Q6ZQX7 453 aa12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 OPN3Q9H1Y3 402 aaPredicted RBP12.94□□□□□ -0.34
NOTCH4-201ENST00000375023 IGKV3-20P01619 116 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC7A10Q9NS82 523 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 PLPP2O43688 288 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 RPL30P62888 115 aaKnown RBP12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 MRGPRFQ96AM1 343 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC45A2Q9UMX9 530 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 GZMKP49863 264 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 OR8A1Q8NGG7 326 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 REPIN1Q9BWE0 567 aaKnown RBP12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 TMED3Q9Y3Q3 217 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 AHDC1Q5TGY3 1603 aaPredicted RBP12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 ARRDC1Q8N5I2 433 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 SH2D2AQ9NP31 389 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 MMP26Q9NRE1 261 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 CEACAM3P40198 252 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 CD300CQ08708 224 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 KIAA0040Q15053 153 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 PARP11Q9NR21 331 aa12.93□□□□□ -0.34
NOTCH4-201ENST00000375023 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 MPC2O95563 127 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 BRS3P32247 399 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 TMEM33P57088 247 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 B2MP61769 119 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 GHITMQ9H3K2 345 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 FKBP11Q9NYL4 201 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 TCRBV16S1A1N1A0A5B0 115 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 CST4P01036 141 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 PRNTQ86SH4 94 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 OR6C3Q9NZP0 311 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 DTX4Q9Y2E6 619 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 GABRA1P14867 456 aa12.92□□□□□ -0.34
NOTCH4-201ENST00000375023 OR4X1Q8NH49 305 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms