RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 C4orf17Q53FE4 359 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF695Q8IW36 515 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM252Q8N6L7 170 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 MOB3AQ96BX8 217 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 DDA1Q9BW61 102 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 ANGPTL4Q9BY76 406 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF442Q9H7R0 627 aa9.59□□□□□ -0.88
CCDC40-203ENST00000374877 CXorf65A6NEN9 183 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 PITX3O75364 302 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 JMJD7P0C870 316 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 NR2C1P13056 603 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 CCL4P13236 92 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 FABP4P15090 132 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 ICAM4Q14773 271 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 CXorf66Q5JRM2 361 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-203ENST00000374877 OR2T2Q6IF00 324 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
CCDC40-203ENST00000374877 OR5L2Q8NGL0 311 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 SPSB1Q96BD6 273 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 PLEKHF2Q9H8W4 249 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 ST3GAL6Q9Y274 331 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 NPIPA2E9PIF3 369 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 NPIPA3F8WFD2 350 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 RBP2P50120 134 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 DYNLT3P51808 116 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 KHDC3LQ587J8 217 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 MYOTQ9UBF9 498 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
CCDC40-203ENST00000374877 A0A087WWC5 75 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 BTBD17A6NE02 478 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 MPPED1O15442 326 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 DHHO43323 396 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 DKK1O94907 266 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 MT-CO3P00414 261 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 LCATP04180 440 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 CD63P08962 238 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 GAMTQ14353 236 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 DCAF12Q5T6F0 453 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 CMTM1Q8IZ96 169 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 OSR2Q8N2R0 312 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 SLC25A31Q9H0C2 315 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 PRO1933Q9H354 126 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 BCO1Q9HAY6 547 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 GLRX2Q9NS18 164 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 EXPH5Q8NEV8 1989 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 TRDCB7Z8K6 153 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 ADAM20O43506 726 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 OR7C1O76099 320 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 CDS2O95674 445 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 PPYP01298 95 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 CNN3Q15417 329 aaKnown RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 SSX9Q7RTT3 188 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM123Q8N131 208 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 NABP1Q96AH0 204 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF837Q96EG3 531 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 MEGF10Q96KG7 1140 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 ULBP2Q9BZM5 246 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 UFSP2Q9NUQ7 469 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 IGKV1-12A0A0C4DH73 117 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 A0A1B0GV90 55 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 PROB1E7EW31 1015 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 IGKV1D-12P01611 117 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 RNF224P0DH78 156 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 EPHA1P21709 976 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 MALLQ13021 153 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 TRIP6Q15654 476 aaKnown RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 SLC25A24Q6NUK1 477 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 CPNE4Q96A23 557 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-203ENST00000374877 C10orf35Q96D05 121 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
CCDC40-203ENST00000374877 ZFAND5O76080 213 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 HSPB1P04792 205 aaKnown RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 GLIPR1P48060 266 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 RAB11AP62491 216 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 SPIN2AQ99865 258 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 SPIN2BQ9BPZ2 258 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 LYRM2Q9NU23 88 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 P4HTMQ9NXG6 502 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 C19orf25Q9UFG5 118 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 CFAP54Q96N23 3096 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 OR5H1A6NKK0 313 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 C9J4A7 227 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 TNFSF12O43508 249 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 GNRHRP30968 328 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 OTX1P32242 354 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF154Q13106 437 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF100Q8IYN0 542 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 C17orf78Q8N4C9 275 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 FAM210BQ96KR6 192 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM222Q9H0R3 208 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 SIRT7Q9NRC8 400 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms