RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SHARPINQ9H0F6 387 aa10.34□□□□□ -0.75
HMGCL-202ENST00000374487 DNAJB11Q9UBS4 358 aa10.34□□□□□ -0.75
HMGCL-202ENST00000374487 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
HMGCL-202ENST00000374487 TENM4Q6N022 2769 aa10.34□□□□□ -0.75
HMGCL-202ENST00000374487 SYNGR1O43759 233 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GLI4P10075 376 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 PRKACAP17612 351 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 M6PRP20645 277 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 AADACP22760 399 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 CA6P23280 308 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 DUSP1P28562 367 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 UCP3P55916 312 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 UBE2NP61088 152 aaKnown RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GNG3P63215 75 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 NAAAQ02083 359 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 MPV17LQ2QL34 196 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 OR2T2Q6IF00 324 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GCNT2Q8N0V5 402 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 MRPL24Q96A35 216 aaKnown RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GALNT14Q96FL9 552 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 SUCNR1Q9BXA5 334 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 DNTTIP1Q9H147 329 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 PLK3Q9H4B4 646 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 OR5B21A6NL26 309 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 LILRA1O75019 489 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 DIRAS3O95661 229 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 SCGB1D2O95969 90 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 PPYP01298 95 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 TK1P04183 234 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 Q6ZPA2 131 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GALNT11Q8NCW6 608 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 TRIB1Q96RU8 372 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GLRX2Q9NS18 164 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 IL36RNQ9UBH0 155 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 NBASA2RRP1 2371 aa10.33□□□□□ -0.76
HMGCL-202ENST00000374487 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
HMGCL-202ENST00000374487 BET1O15155 118 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 TMEM187Q14656 261 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 FAM209AQ5JX71 171 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 SPACA1Q9HBV2 294 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 OR2S2Q9NQN1 319 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 LSM5Q9Y4Y9 91 aaKnown RBP10.32□□□□□ -0.76
HMGCL-202ENST00000374487 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
HMGCL-202ENST00000374487 A0A1W2PR80 420 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 K7EPK0 472 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
HMGCL-202ENST00000374487 GNLYP22749 145 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 TSC22D1Q15714 1073 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 CCDC36Q8IYA8 594 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 LGI3Q8N145 548 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 FAM71E2Q8N5Q1 922 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF488Q96MN9 340 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 CDH20Q9HBT6 801 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 BARX1Q9HBU1 254 aaPredicted RBP10.32□□□□□ -0.76
HMGCL-202ENST00000374487 Q9N2K0 584 aa10.32□□□□□ -0.76
HMGCL-202ENST00000374487 FBXO9Q9UK97 447 aaPredicted RBP10.32□□□□□ -0.76
HMGCL-202ENST00000374487 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 J3QKU1 62 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 HS3ST1O14792 307 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 TAAR5O14804 337 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 DEDDO75618 318 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 LYZL6O75951 148 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 NAPSAO96009 420 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 KIR2DS4P43632 304 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 EIF5AP63241 154 aaKnown RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 IL24Q13007 206 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 KIR2DS1Q14954 304 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SRSF7Q16629 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SPIN3Q5JUX0 258 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 Q6ZS49 121 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 FAM214BQ7L5A3 538 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 CNEP1R1Q8N9A8 125 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF565Q8N9K5 539 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 BOLLQ8N9W6 283 aaKnown RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SPERTQ8NA61 448 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SLC5A7Q9GZV3 580 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 COQ3Q9NZJ6 369 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 RCC2Q9P258 522 aaKnown RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SHANK1Q9Y566 2161 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 IGHG3P01860 377 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms