RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 RAMP1O60894 148 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 LY86O95711 162 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 MMP9P14780 707 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 CTSSP25774 331 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 MSX1P28360 303 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 PIGPP57054 158 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 RND3P61587 244 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 H3F3AP84243 136 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 GAMTQ14353 236 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 HNF4GQ14541 408 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 KISS1Q15726 138 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 GALNTL5Q7Z4T8 443 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 COMMD2Q86X83 199 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 SPACA3Q8IXA5 215 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 CCDC71LQ8N9Z2 235 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 DDIT4LQ96D03 193 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 BOD1Q96IK1 185 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 JSRP1Q96MG2 331 aaPredicted RBP12.97□□□□□ -0.33
UBXN11-204ENST00000374217 MRPL13Q9BYD1 178 aaKnown RBP12.97□□□□□ -0.33
UBXN11-204ENST00000374217 ALKBH4Q9NXW9 302 aa12.97□□□□□ -0.33
UBXN11-204ENST00000374217 USP24Q9UPU5 2620 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 C17orf51A8MQB3 221 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
UBXN11-204ENST00000374217 SOD3P08294 240 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 CXCL1P09341 107 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF728P0DKX0 622 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 ZNF17P17021 662 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 CSNK1A1P48729 337 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBXN11-204ENST00000374217 POU3F1Q03052 451 aaPredicted RBP12.96□□□□□ -0.33
UBXN11-204ENST00000374217 TLE3Q04726 772 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 TLE4Q04727 773 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 OR2T2Q6IF00 324 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 SPNS3Q6ZMD2 512 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 Q6ZSR3 168 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 HSD17B11Q8NBQ5 300 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 OR2G3Q8NGZ4 309 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 RNF138Q8WVD3 245 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.33
UBXN11-204ENST00000374217 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 APC2O95996 2303 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 TRAV1-1A0A0B4J248 108 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ANKUB1A6NFN9 424 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 G3V3Y1 287 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 CYB5BO43169 146 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 RNF224P0DH78 156 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR5H8P0DN80 308 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 PTGDSP41222 190 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ZNF121P58317 390 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ERVFRD-1P60508 538 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 LSM6P62312 80 aaKnown RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ARG2P78540 354 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 HLA-DRB3P79483 266 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 BAXQ07812 192 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 MFAP5Q13361 173 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 JOSD1Q15040 202 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR1C1Q15619 314 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 FAM185AQ8N0U4 392 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 FBXL14Q8N1E6 418 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR14K1Q8NGZ2 314 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 MEGF10Q96KG7 1140 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 RHOVQ96L33 236 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 SPACA5Q96QH8 159 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 RARRES2Q99969 163 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 GPR61Q9BZJ8 451 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ZNF552Q9H707 407 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ZNF701Q9NV72 531 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 AK3Q9UIJ7 227 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ZDHHC8Q9ULC8 765 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 WSB1Q9Y6I7 421 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ASPMQ8IZT6 3477 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ACACAQ13085 2346 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 C1QL1O75973 258 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ZNF41P51814 821 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 FDCSPQ8NFU4 85 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 BSCL2Q96G97 398 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-204ENST00000374217 CTDSP1Q9GZU7 261 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 C11orf1Q9H5F2 150 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 SH2D2AQ9NP31 389 aa12.95□□□□□ -0.34
UBXN11-204ENST00000374217 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms