RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 HIKESHIQ53FT3 197 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 OR2B11Q5JQS5 317 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 COMMD2Q86X83 199 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 UEVLDQ8IX04 471 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 LGI3Q8N145 548 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 SUMF2Q8NBJ7 301 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 OR6X1Q8NH79 312 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 HPSE2Q8WWQ2 592 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ERGIC1Q969X5 290 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 MRPL24Q96A35 216 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 C18orf12Q96KH6 178 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 MRGPRX4Q96LA9 322 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 SYT3Q9BQG1 590 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 CHST5Q9GZS9 411 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 NECAP2Q9NVZ3 263 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 MED29Q9NX70 200 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 B3GAT1Q9P2W7 334 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ANXA10Q9UJ72 324 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 CACNA1CQ13936 2221 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 NPIPA2E9PIF3 369 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 NPIPA3F8WFD2 350 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ST8SIA3O43173 380 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 KALRNO60229 2985 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 IGHG3P01860 377 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 PRH1P02810 166 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 OPN1LWP04000 364 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 EDN3P14138 238 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 RPS23P62266 143 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 LSM6P62312 80 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 SRPXP78539 464 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 FOXF1Q12946 379 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ZNF266Q14584 549 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 HIST3H3Q16695 136 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 PLPPR5Q32ZL2 321 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 FOXRED2Q8IWF2 684 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 ISOC2Q96AB3 205 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 MUCL1Q96DR8 90 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 SPRR3Q9UBC9 169 aa9.89□□□□□ -0.83
TSPAN1-201ENST00000372003 EXPH5Q8NEV8 1989 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 SMG1Q96Q15 3661 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 SPENQ96T58 3664 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 PHF3Q92576 2039 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 A0A087WZY1 265 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 A0A1W2PP11 408 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 H3BML4 177 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 RPL36A-HNRNPH2H7BZ11 118 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 IFNA10P01566 189 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 KIAA0141Q14154 515 aaPredicted RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 CRIP3Q6Q6R5 217 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 DPPA3Q6W0C5 159 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 RNF144BQ7Z419 303 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 WDFY1Q8IWB7 410 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 ZNF283Q8N7M2 679 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 CD300LFQ8TDQ1 290 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 POM121Q96HA1 1249 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 FAM71F1Q96KD3 344 aaPredicted RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 SPACA5Q96QH8 159 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 PIGQQ9BRB3 760 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 SMIM3Q9BZL3 60 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 WFDC1Q9HC57 220 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 GAR1Q9NY12 217 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 KIAA1456Q9P272 454 aa9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 MRPS18CQ9Y3D5 142 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-201ENST00000372003 A0A1W2PPE2 198 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 RBFOX3A6NFN3 312 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 DHRS7CA6NNS2 312 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 B4DEV8 164 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 DHRS3O75911 302 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 ZNF728P0DKX0 622 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 OR5H8P0DN80 308 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 PIGPP57054 158 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 B3GALT5-AS1P59052 145 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 SRYQ05066 204 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 GNMTQ14749 295 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 C3AR1Q16581 482 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 PLXDC2Q6UX71 529 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 ST6GALNAC3Q8NDV1 305 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 OR10G4Q8NGN3 311 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 POC1BQ8TC44 478 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 MARS2Q96GW9 593 aaKnown RBP9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 Q96M66 194 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 OXGR1Q96P68 337 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 PCNX3Q9H6A9 2034 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 ZNF319Q9P2F9 582 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 SH3BGRL2Q9UJC5 107 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 SPTA1P02549 2419 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
TSPAN1-201ENST00000372003 AQP7O14520 342 aa9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 CDS2O95674 445 aa9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 HSPB1P04792 205 aaKnown RBP9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 ARG1P05089 322 aa9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 MMP9P14780 707 aa9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 SFTPDP35247 375 aa9.86□□□□□ -0.83
TSPAN1-201ENST00000372003 GFRA1P56159 465 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms