RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 PLPP2O43688 288 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 IGKV3-15P01624 115 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 RPL7P18124 248 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 UBE2L3P68036 154 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 FBXW9Q5XUX1 488 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 ATG4DQ86TL0 474 aaPredicted RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 OR8D4Q8NGM9 314 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 F5P12259 2224 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 IGHV1-45A0A0A0MS14 117 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 ICMTO60725 284 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SFT2D2O95562 160 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 POLR2GP62487 172 aaKnown RBP eCLIP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 NHLH1Q02575 133 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 NHLH2Q02577 135 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 ZNF721Q8TF20 911 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 ZCCHC14Q8WYQ9 949 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 CXorf58Q96LI9 332 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 FRRS1LQ9P0K9 344 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SLC45A2Q9UMX9 530 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 A0A1W2PPV9 198 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 DLL1O00548 723 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 TRAPPC2P0DI81 140 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 TRAPPC2BP0DI82 140 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 GLDNQ6ZMI3 551 aaPredicted RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 GAPTQ8N292 157 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 MUC20Q8N307 709 aaPredicted RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 ASB5Q8WWX0 329 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 NIT2Q9NQR4 276 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 TMEM38BQ9NVV0 291 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 TMED3Q9Y3Q3 217 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 OR5AL1P0C617 328 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 FAM222BQ8WU58 562 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 CCL19Q99731 98 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 GSX2Q9BZM3 304 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SH2D2AQ9NP31 389 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 STARD10Q9Y365 291 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 MOSPD3O75425 235 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 WNT5AP41221 380 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 CRYBB2P43320 205 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PLAURQ03405 335 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 WDR34Q96EX3 536 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 MS4A3Q96HJ5 214 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SF3B5Q9BWJ5 86 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PPIAL4EA0A075B759 164 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PPIAL4DF5H284 164 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 RNASEK-C17orf49H0YIS7 233 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PPIAL4FP0DN26 164 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 CD1BP29016 333 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 TCL1AP56279 114 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SSBP1Q04837 148 aaKnown RBP7.5□□□□□ -1.21
ABCA4-201ENST00000370225 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 PPIAL4AQ9Y536 164 aa7.5□□□□□ -1.21
ABCA4-201ENST00000370225 SCN2AQ99250 2005 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 RHBDL1O75783 438 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 RPL30P62888 115 aaKnown RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 MGAT2Q10469 447 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 DHRS2Q13268 280 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 ST3GAL2Q16842 350 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 C5orf17Q8NAS9 161 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 DUSP18Q8NEJ0 188 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 ADIPOR1Q96A54 375 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 CISD1Q9NZ45 108 aaKnown RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 TMSB15BA0A087X1C1 80 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 MAP1LC3B2A6NCE7 125 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 HSBP1O75506 76 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 TMEM37Q8WXS4 190 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 RAB40CQ96S21 281 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 MAP1LC3BQ9GZQ8 125 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 CCL28Q9NRJ3 127 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 PRSS50Q9UI38 385 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 BRWD1Q9NSI6 2320 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 NUP214P35658 2090 aaPredicted RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 GSTZ1O43708 216 aaPredicted RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 RPL31P62899 125 aaKnown RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 ZNF154Q13106 437 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 OR8I2Q8N0Y5 310 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 SPICQ8N5J4 248 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 OR4P4Q8NGL7 312 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 YTHDF2Q9Y5A9 579 aaKnown RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 UPK3AO75631 287 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 PGA3P0DJD8 388 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 INPP5JQ15735 1006 aaPredicted RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 SLC35E4Q6ICL7 350 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 NPY1RP25929 384 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 CEBPDP49716 269 aaPredicted RBP7.49□□□□□ -1.21
ABCA4-201ENST00000370225 PSG5Q15238 335 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 FHL5Q5TD97 284 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 LIAT1Q6ZQX7 453 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 UBR3Q6ZT12 1888 aa7.49□□□□□ -1.21
ABCA4-201ENST00000370225 ZBTB44Q8NCP5 570 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms