RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 IGHV3-13P01766 116 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 IGHV3-7P01780 117 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 MEX3AA1L020 520 aaKnown RBP11.07□□□□□ -0.64
HCFC1-202ENST00000369984 C12orf73Q69YU5 71 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 CNRIP1Q96F85 164 aaPredicted RBP11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ABHD14AQ9BUJ0 271 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 LGALS7P47929 136 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 FMODQ06828 376 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 AESQ08117 197 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF766Q5HY98 468 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF841Q6ZN19 808 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 LIAT1Q6ZQX7 453 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF683Q8IZ20 524 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 SIGLEC7Q9Y286 467 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 P01737 135 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 SMIM6P0DI80 62 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 SEZ6L2Q6UXD5 910 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 IGHV3-43A0A0B4J1X8 118 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 MBPP02686 304 aaPredicted RBP11.07□□□□□ -0.64
HCFC1-202ENST00000369984 IGHV3-43DP0DP04 118 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 HLA-GP17693 338 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 TMEM33P57088 247 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 UBE2L3P68036 154 aaKnown RBP11.07□□□□□ -0.64
HCFC1-202ENST00000369984 HLA-BQ31612 363 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 A0A0B4J2E0 115 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 A0A1B0GX12 115 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF774Q6NX45 483 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 OR13G1Q8NGZ3 307 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
HCFC1-202ENST00000369984 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
HCFC1-202ENST00000369984 DNAL4O96015 105 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 HLA-DRB3P79483 266 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 NEURL2Q9BR09 285 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 A0A1W2PR80 420 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 IGLV3-27P01718 113 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 XAF1Q6GPH4 301 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 DLK1P80370 383 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 CST9Q5W186 159 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 GNRHR2Q96P88 292 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF236Q9UL36 1845 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 RAG2P55895 527 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 RIGQ13278 110 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 RFESDQ8TAC1 157 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 MARVELD1Q9BSK0 173 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 GEMIN2O14893 280 aaKnown RBP11.06□□□□□ -0.64
HCFC1-202ENST00000369984 ACTL6AO96019 429 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 FGF9P31371 208 aaPredicted RBP11.06□□□□□ -0.64
HCFC1-202ENST00000369984 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
HCFC1-202ENST00000369984 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 MED12Q93074 2177 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 IGSF23A1L1A6 192 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 GABRA1P14867 456 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 MPV17LQ2QL34 196 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 FLYWCH2Q96CP2 140 aaKnown RBP11.06□□□□□ -0.64
HCFC1-202ENST00000369984 WDFY2Q96P53 400 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 DHRS7CA6NNS2 312 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 GVQW1Q8N7I0 195 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 SLC26A1Q9H2B4 701 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 MMP25Q9NPA2 562 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
HCFC1-202ENST00000369984 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
HCFC1-202ENST00000369984 LEUTXA8MZ59 168 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 B4DEV8 164 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 ISLRO14498 428 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TCL1AP56279 114 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 RRN3P1Q2M238 152 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 OR11G2Q8NGC1 345 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 SPTBN2O15020 2390 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 APCSP02743 223 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 JMJD6Q6NYC1 403 aaPredicted RBP11.05□□□□□ -0.64
HCFC1-202ENST00000369984 PRSS54Q6PEW0 395 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 SSX8Q7RTT4 187 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 ARRDC1-AS1Q9H2J1 176 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 PRSS50Q9UI38 385 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 MGPP08493 103 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 CCL2P13500 99 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 MRGPRDQ8TDS7 321 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 CORTO00230 105 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 PDE6DO43924 150 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 TM4SF19Q96DZ7 209 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 CACNA1IQ9P0X4 2223 aa11.05□□□□□ -0.64
HCFC1-202ENST00000369984 CLDN18P56856 261 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms