RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EDN3P14138 238 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 BLVRBP30043 206 aaPredicted RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 GLP1RP43220 463 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 ZNF345Q14585 488 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 SPATA46Q5T0L3 261 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR8U1Q8NH10 309 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 TERB2Q8NHR7 220 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 MITD1Q8WV92 249 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 NEU1Q99519 415 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 WNT5BQ9H1J7 359 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 HEATR1Q9H583 2144 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 DIDO1Q9BTC0 2240 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 DNPH1O43598 174 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 ADAP1O75689 374 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 CHRM2P08172 466 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 FCGR2AP12318 317 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 CAV2P51636 162 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 PLAC9Q5JTB6 97 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR5AS1Q8N127 324 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 CISD2Q8N5K1 135 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 RBMXL3Q8N7X1 1067 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 ZDHHC22Q8N966 263 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 C9orf106Q8NAJ2 232 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR1F12Q8NHA8 337 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 RNASE11Q8TAA1 199 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 CPT1CQ8TCG5 803 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR2H1Q9GZK4 316 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 GPR173Q9NS66 373 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 GAR1Q9NY12 217 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 ZNF107Q9UII5 783 aaPredicted RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 PIGLQ9Y2B2 252 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 RHBDD3Q9Y3P4 386 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 URGCP-MRPS24S4R325 110 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 PSMB6P28072 239 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 RAB5CP51148 216 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 QRFPP83859 136 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
TPM3-212ENST00000368533 OR56B1Q8NGI3 324 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 CD300LFQ8TDQ1 290 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 MRGPRFQ96AM1 343 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 CHST5Q9GZS9 411 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 OR10A2Q9H208 303 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 OPA3Q9H6K4 179 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 EHFQ9NZC4 300 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 DOK5Q9P104 306 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 LPAR3Q9UBY5 353 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 TMEM14DPA8MWL7 114 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 SFTPBP07988 381 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 CELA3BP08861 270 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 HOXB5P09067 269 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 GABRR1P24046 479 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 S100A10P60903 97 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 DOK3Q7L591 496 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 ASB13Q8WXK3 278 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 MOB1AQ9H8S9 216 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 CYTL1Q9NRR1 136 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 TMEM100Q9NV29 134 aa9.19□□□□□ -0.94
TPM3-212ENST00000368533 SYNGR3O43761 229 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 NGFP01138 241 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 RAB1AP62820 205 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 GRB2P62993 217 aaKnown RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 KISS1Q15726 138 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 CHRFAM7AQ494W8 412 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 IGF2-ASQ6U949 168 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 C1QL2Q7Z5L3 287 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 MYPOPQ86VE0 399 aaPredicted RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 SPTSSAQ969W0 71 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 FAM230AA0A1W2PPH8 454 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 ZNF727A8MUV8 499 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 H0YIZ8 118 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 PHOX2AO14813 284 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 AGFG2O95081 481 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 TMEM225BP0DP42 221 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 HOXA5P20719 270 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 SNU13P55769 128 aaKnown RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 TMEM50BP56557 158 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 KCNMB1Q16558 191 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 NSUN5P2Q63ZY6 315 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 REEP6Q96HR9 211 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 RGCCQ9H4X1 137 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 MYOZ1Q9NP98 299 aaPredicted RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 PARPBPQ9NWS1 579 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 SLC2A8Q9NY64 477 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 ANGPTL7O43827 346 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 IL18BPO95998 194 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 CD37P11049 281 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 SLC25A4P12235 298 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 FABP4P15090 132 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 GLRA1P23415 457 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 SULT1A1P50225 295 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 TAS2R31P59538 309 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 ZNF343Q6P1L6 599 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms