RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 GJC3Q8NFK1 279 aa22.81■■□□□ 1.24
EFNA1-202ENST00000368407 ABHD3Q8WU67 409 aa22.81■■□□□ 1.24
EFNA1-202ENST00000368407 SLC35B3Q9H1N7 401 aa22.81■■□□□ 1.24
EFNA1-202ENST00000368407 NECAP2Q9NVZ3 263 aa22.81■■□□□ 1.24
EFNA1-202ENST00000368407 MCTS1Q9ULC4 181 aaKnown RBP22.81■■□□□ 1.24
EFNA1-202ENST00000368407 LSM5Q9Y4Y9 91 aaKnown RBP22.81■■□□□ 1.24
EFNA1-202ENST00000368407 ZNF726A6NNF4 738 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 ZNF14P17017 642 aaPredicted RBP22.8■■□□□ 1.24
EFNA1-202ENST00000368407 ABLIM2Q6H8Q1 611 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 GFRALQ6UXV0 394 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 ZNF701Q9NV72 531 aaPredicted RBP22.8■■□□□ 1.24
EFNA1-202ENST00000368407 SYNGR4O95473 234 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 MBPP02686 304 aaPredicted RBP22.8■■□□□ 1.24
EFNA1-202ENST00000368407 SERPINA2P20848 420 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 MSR1P21757 451 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 CAMLGP49069 296 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 UCP3P55916 312 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 UBE2V2Q15819 145 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 FOXRED2Q8IWF2 684 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 LRRC18Q8N456 261 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 ERGIC1Q969X5 290 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 SPSB1Q96BD6 273 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 C18orf12Q96KH6 178 aa22.8■■□□□ 1.24
EFNA1-202ENST00000368407 LINC00587B1AMM8 73 aa22.79■■□□□ 1.24
EFNA1-202ENST00000368407 OR5H8P0DN80 308 aa22.79■■□□□ 1.24
EFNA1-202ENST00000368407 CPT1CQ8TCG5 803 aa22.79■■□□□ 1.24
EFNA1-202ENST00000368407 SPACA1Q9HBV2 294 aa22.79■■□□□ 1.24
EFNA1-202ENST00000368407 PLEKHJ1Q9NW61 149 aa22.79■■□□□ 1.24
EFNA1-202ENST00000368407 RP1L1Q8IWN7 2480 aaPredicted RBP22.79■■□□□ 1.24
EFNA1-202ENST00000368407 ZNF716A6NP11 495 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 AP4M1O00189 453 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 CYTIPO60759 359 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 FABP9Q0Z7S8 132 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 HPSE2Q8WWQ2 592 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 PRRG4Q9BZD6 226 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 GTF3C1Q12789 2109 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 IGKV1D-8A0A087WSZ0 117 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 ATXN7O15265 892 aaPredicted RBP22.78■■□□□ 1.24
EFNA1-202ENST00000368407 VAMP5O95183 116 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 SNRNP70P08621 437 aaKnown RBP22.78■■□□□ 1.24
EFNA1-202ENST00000368407 FCGR2AP12318 317 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 DUSP1P28562 367 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 ETV3LQ6ZN32 361 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 LIAT1Q6ZQX7 453 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 MAFIPQ8WZ33 124 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 TRIB1Q96RU8 372 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 NELFAQ9H3P2 528 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 CLCF1Q9UBD9 225 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 KIAA1549Q9HCM3 1950 aa22.78■■□□□ 1.24
EFNA1-202ENST00000368407 SLC22A20A6NK97 555 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 UMAD1C9J7I0 102 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 ANOS1P23352 680 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 PIGPP57054 158 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 POLR2GP62487 172 aaKnown RBP eCLIP22.77■■□□□ 1.24
EFNA1-202ENST00000368407 RBMS3Q6XE24 437 aaKnown RBP22.77■■□□□ 1.24
EFNA1-202ENST00000368407 SLC16A13Q7RTY0 426 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 FAM57AQ8TBR7 257 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 TMEM54Q969K7 222 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 TMPRSS5Q9H3S3 457 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 UNKLQ9H9P5 680 aaKnown RBP22.77■■□□□ 1.24
EFNA1-202ENST00000368407 KCNJ16Q9NPI9 418 aa22.77■■□□□ 1.24
EFNA1-202ENST00000368407 BTBD17A6NE02 478 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 A6NLC8 198 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 ZNF728P0DKX0 622 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 SULT1A1P50225 295 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 CLINT1Q14677 625 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 ACSF3Q4G176 576 aaPredicted RBP22.76■■□□□ 1.23
EFNA1-202ENST00000368407 LGI3Q8N145 548 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 YPEL4Q96NS1 127 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 ZNF385AQ96PM9 386 aaKnown RBP22.76■■□□□ 1.23
EFNA1-202ENST00000368407 METTL9Q9H1A3 318 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 A0A1W2PPH5 198 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 AHRRA9YTQ3 701 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 M0R036 132 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 IFNA17P01571 189 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 EDN3P14138 238 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 GUCA1AP43080 201 aaPredicted RBP22.76■■□□□ 1.23
EFNA1-202ENST00000368407 ASCL4Q6XD76 172 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 ZIC4Q8N9L1 334 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 POM121Q96HA1 1249 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 SF3B5Q9BWJ5 86 aaKnown RBP22.76■■□□□ 1.23
EFNA1-202ENST00000368407 SMIM3Q9BZL3 60 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 NIT2Q9NQR4 276 aa22.76■■□□□ 1.23
EFNA1-202ENST00000368407 COL6A6A6NMZ7 2263 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 E9PLN8 166 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 OR8U8P0C7N1 319 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 CHATP28329 748 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 ZNF616Q08AN1 781 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 C6orf201Q7Z4U5 140 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 OR5D18Q8NGL1 313 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 ABHD14BQ96IU4 210 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 BBC3Q96PG8 261 aaPredicted RBP22.75■■□□□ 1.23
EFNA1-202ENST00000368407 SYT3Q9BQG1 590 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 EIF5A2Q9GZV4 153 aaKnown RBP22.75■■□□□ 1.23
EFNA1-202ENST00000368407 WFDC1Q9HC57 220 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 TMED3Q9Y3Q3 217 aa22.75■■□□□ 1.23
EFNA1-202ENST00000368407 K7N7A8 449 aa22.74■■□□□ 1.23
EFNA1-202ENST00000368407 ST8SIA3O43173 380 aa22.74■■□□□ 1.23
EFNA1-202ENST00000368407 SRPXP78539 464 aa22.74■■□□□ 1.23
EFNA1-202ENST00000368407 RTN4IP1Q8WWV3 396 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms