RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 STX3Q13277 289 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 TPBGQ13641 420 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CACNA1SQ13698 1873 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 TRIP13Q15645 432 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PSG3Q16557 428 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 FBXO48Q5FWF7 155 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 ZBED9Q6R2W3 1325 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CLEC20AQ6ZU45 233 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PAGE2Q7Z2X7 111 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 C10orf107Q8IVU9 208 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 LY6G5BQ8NDX9 201 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PHOSPHO2Q8TCD6 241 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 SCGB1C1Q8TD33 95 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 ZCCHC13Q8WW36 166 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 UBE2WQ96B02 151 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CATSPER2Q96P56 530 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 OLFM3Q96PB7 478 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 SUCNR1Q9BXA5 334 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 TSGA10Q9BZW7 698 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 METTL17Q9H7H0 456 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 OR5V1Q9UGF6 321 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 MCTS1Q9ULC4 181 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 TRAPPC1Q9Y5R8 145 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 ATRNO75882 1429 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 IGLV10-54A0A075B6I4 117 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 SDHAF1A6NFY7 115 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 C8orf87E5RJ46 101 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 F8VP50 259 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 J3QRE1 110 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 PLPP3O14495 311 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 AQP9O43315 295 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF3P17036 446 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 GTF2H1P32780 548 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 EVI2BP34910 448 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF83P51522 516 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 HBG1P69891 147 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 HBG2P69892 147 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 CD164Q04900 197 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 CASP8Q14790 479 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 LGALSLQ3ZCW2 172 aaPredicted RBP1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 COPS6Q7L5N1 327 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 SSX6Q7RTT6 188 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 COMTD1Q86VU5 262 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 Q8NAQ8 132 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 OR4A5Q8NH83 315 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 PGLYRP3Q96LB9 341 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 APOL4Q9BPW4 351 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 TAPBPLQ9BX59 468 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 OR2D2Q9H210 308 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 DIABLOQ9NR28 239 aa1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 TBL2Q9Y4P3 447 aaKnown RBP1.52□□□□□ -2.17
ECHDC1-201ENST00000368287 IGHV1-45A0A0A0MS14 117 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 IGHV2-26A0A0B4J1V2 119 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 LEUTXA8MZ59 168 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 C3orf84H3BNL1 204 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 SGCEO43556 437 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 TCF21O43680 179 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 PSIP1O75475 530 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 LDOC1O95751 146 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 HLA-AP01891 365 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 SPNP16150 400 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 COILP38432 576 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 MAGEA6P43360 314 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 GZMMP51124 257 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 OR2B6P58173 313 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 TSPAN5P62079 268 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 TNFRSF9Q07011 255 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 ZBTB6Q15916 424 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 BSXQ3C1V8 233 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 OR10J3Q5JRS4 329 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 SMARCD3Q6STE5 483 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 DGAT2L6Q6ZPD8 337 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 TMEM239Q8WW34 195 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 C19orf60Q96EN9 201 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 SLC25A44Q96H78 314 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 REEP6Q96HR9 211 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 TRIB3Q96RU7 358 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 PITX2Q99697 317 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 B9D2Q9BPU9 175 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 ABCG5Q9H222 651 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 MYO16Q9Y6X6 1858 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 SHANK3Q9BYB0 1731 aa1.51□□□□□ -2.17
ECHDC1-201ENST00000368287 GOLGA8QA0A0J9YX86 632 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 FAM183AA6NL82 134 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 D6RAR5 112 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 POLR3GO15318 223 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 EPPINO95925 133 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 APOA1P02647 267 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 GP1BAP07359 652 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 SLC2A1P11166 492 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 KCNJ3P48549 501 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 DYNLL1P63167 89 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 BCL2A1Q16548 175 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 HES3Q5TGS1 186 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 Q6ZQT7 251 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 FAM183BPQ6ZVS7 135 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 RPRMLQ8N4K4 120 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 OR5P3Q8WZ94 311 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms