RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 OSR2Q8N2R0 312 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 SLC25A45Q8N413 288 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 LRTM2Q8N967 370 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 ABHD5Q8WTS1 349 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 SPTSSAQ969W0 71 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 FAM122AQ96E09 287 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 ALKBH3Q96Q83 286 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 DEFB126Q9BYW3 111 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 DTYMKP23919 212 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 MSX1P28360 303 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 NTF4P34130 210 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 ZNF266Q14584 549 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 RHBDD2Q6NTF9 364 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 MAML2Q8IZL2 1156 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 SPACA9Q96E40 222 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
PRKN-205ENST00000366897 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
PRKN-205ENST00000366897 KIAA2026Q5HYC2 2103 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 IGKV1D-13A0A0B4J2D9 117 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 ZFAND5O76080 213 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 NRASP01111 189 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 IGKV1-13P0DP09 117 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 OTX1P32242 354 aaPredicted RBP11.71□□□□□ -0.53
PRKN-205ENST00000366897 MAS1LP35410 378 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 ZNF880Q6PDB4 577 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.53
PRKN-205ENST00000366897 CMTM1Q8IZ96 169 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.53
PRKN-205ENST00000366897 SNX22Q96L94 193 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 KIAA1456Q9P272 454 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 IL36RNQ9UBH0 155 aa11.71□□□□□ -0.53
PRKN-205ENST00000366897 TRDCB7Z8K6 153 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 ZNF587BE7ETH6 402 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 TNFSF11O14788 317 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 CHST1O43916 411 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 F10P00742 488 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 LCN15Q6UWW0 184 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 ZNF818PQ6ZRF7 136 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 THNSL2Q86YJ6 484 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 GAPTQ8N292 157 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 FGFBP3Q8TAT2 258 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 TVP23CQ96ET8 276 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 ANGPTL4Q9BY76 406 aa11.71□□□□□ -0.54
PRKN-205ENST00000366897 NOSIPQ9Y314 301 aaKnown RBP11.71□□□□□ -0.54
PRKN-205ENST00000366897 PITX3O75364 302 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 SCRG1O75711 98 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 SCTP09683 121 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 MMP9P14780 707 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 RPS18P62269 152 aaKnown RBP11.7□□□□□ -0.54
PRKN-205ENST00000366897 TMEM267Q0VDI3 215 aaPredicted RBP11.7□□□□□ -0.54
PRKN-205ENST00000366897 PLCXD3Q63HM9 321 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 SLC25A26Q70HW3 274 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 CLDND2Q8NHS1 167 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 INTS12Q96CB8 462 aaKnown RBP11.7□□□□□ -0.54
PRKN-205ENST00000366897 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 C11orf1Q9H5F2 150 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 ZNF665Q9H7R5 613 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 BCO1Q9HAY6 547 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 GFOD1Q9NXC2 390 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 LAMTOR5O43504 91 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 IGHV3-9P01782 118 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 PGA5P0DJD9 388 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 ZNF32P17041 273 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 ZNF92Q03936 586 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 MALLQ13021 153 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 ZIC4Q8N9L1 334 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 CRLF2Q9HC73 371 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
PRKN-205ENST00000366897 FREM1Q5H8C1 2179 aa11.7□□□□□ -0.54
PRKN-205ENST00000366897 SEC14L6B5MCN3 397 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 HSPA12AO43301 675 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 FUT3P21217 361 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 NXPH1P58417 271 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 DAZAP2Q15038 168 aaPredicted RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 ZNF100Q8IYN0 542 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 SELENOHQ8IZQ5 122 aaKnown RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 RNF138Q8WVD3 245 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 SPSB1Q96BD6 273 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 CHCHD2Q9Y6H1 151 aaPredicted RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 PDCD6O75340 191 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 CCL3P10147 92 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 HIST1H1BP16401 226 aaKnown RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 TCN2P20062 427 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms