RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SYNGR2O43760 224 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 LIFP15018 202 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 MPLP40238 635 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 SPCS3P61009 180 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 MRGPRGQ86SM5 289 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 DEFB123Q8N688 67 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TGIF2Q9GZN2 237 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 Q9N2K0 584 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 WIPI1Q5MNZ9 446 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 FDX2Q6P4F2 183 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 IL36GQ9NZH8 169 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TCFL5Q9UL49 500 aa10.61□□□□□ -0.71
CDC42BPA-203ENST00000366766 TRBV5-5A0A0J9YX44 114 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 LIMK1P53667 647 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 HFEQ30201 348 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 CLEC18BQ6UXF7 455 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ANGPTL4Q9BY76 406 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF230Q9UIE0 474 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 AQP7O14520 342 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 MT-CO3P00414 261 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 HOXD4P09016 255 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 WFDC8Q8IUA0 241 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR4F17Q8NGA8 305 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 GTF3C1Q12789 2109 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 MEOX1P50221 254 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ELF5Q9UKW6 265 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 INO80CQ6PI98 192 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 PTPMT1Q8WUK0 201 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 M0QZ24 198 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 MPDU1O75352 247 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF66Q6ZN08 573 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 SCARF2Q96GP6 870 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 PRNDQ9UKY0 176 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 TRAV38-1A0A0B4J264 116 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 PITX3O75364 302 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 SLC24A4Q8NFF2 622 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 GMPPAQ96IJ6 420 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 GNB4Q9HAV0 340 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 GPR27Q9NS67 375 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 J3QT63 122 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 LPAR6P43657 344 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 HLA-DRB3P79483 266 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 PAX5Q02548 391 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
CDC42BPA-203ENST00000366766 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 CA6P23280 308 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 GNB1P62873 340 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 CEBPEQ15744 281 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 VAX2Q9UIW0 290 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 CHD3Q12873 2000 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 OVCH2Q7RTZ1 564 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 C1orf210Q8IVY1 113 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 NOL4LQ96MY1 436 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 GHITMQ9H3K2 345 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 SHISA7A6NL88 538 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 CXCL3P19876 107 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 KHDC3LQ587J8 217 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 EDN3P14138 238 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 TECRQ9NZ01 308 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 HSF4Q9ULV5 492 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR5H15A6NDH6 313 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 SMIM17P0DL12 118 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 HOXB1P14653 301 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM3AP98173 230 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF154Q13106 437 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 LILRB1Q8NHL6 650 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 ARRDC1-AS1Q9H2J1 176 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 SELENOPP49908 381 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 A0A1W2PNV4 684 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 SP1P08047 785 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 TBC1D26Q86UD7 250 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 LRRTM1Q86UE6 522 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 OR2T10Q8NGZ9 312 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 TNFSF18Q9UNG2 199 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 ATRXP46100 2492 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 PCNX2A6NKB5 2137 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 NQO2P16083 231 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 GAB4Q2WGN9 574 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 TMEM30BQ3MIR4 351 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 FAM109BQ6ICB4 259 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 NPTNQ9Y639 398 aa10.59□□□□□ -0.71
CDC42BPA-203ENST00000366766 COL9A1P20849 921 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 SP6Q3SY56 376 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 C10orf111Q8N326 155 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 CXorf65A6NEN9 183 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 SNCGO76070 127 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 CDRT15L2A8MXV6 281 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 H3BP45 60 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 DEDDO75618 318 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 C9orf40Q8IXQ3 194 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms