RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TAS2R4Q9NYW5 299 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IL36GQ9NZH8 169 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CLEC2DQ9UHP7 191 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TRBV5-5A0A0J9YX44 114 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 NPIPB11E5RHQ5 1161 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GPX5O75715 221 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CD28P10747 220 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PTGFRP43088 359 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 RSBN1Q5VWQ0 802 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TTC23Q5W5X9 447 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 DMKNQ6E0U4 476 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LAIR2Q6ISS4 152 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TMPRSS11AQ6ZMR5 421 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 C16orf82Q7Z2V1 217 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PACRGLQ8N7B6 248 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TNFAIP8L1Q8WVP5 186 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SMIM19Q96E16 107 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CPNE2Q96FN4 548 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 KIRREL1Q96J84 757 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR6C3Q9NZP0 311 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ZNF581Q9P0T4 197 aa10.94□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IRGMA1A4Y4 181 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM172BPA6NC97 362 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A9PA6NNJ1 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LEUTXA8MZ59 168 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 MAGEB3O15480 346 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 AMY1AP04745 511 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 AMY2AP04746 511 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CD2P06729 351 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR3A4PP47883 348 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PIGYQ3MUY2 71 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ZNF565Q8N9K5 539 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR4D6Q8NGJ1 314 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR13A1Q8NGR1 328 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR10K1Q8NGX5 313 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR52N1Q8NH53 320 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PLPPR1Q8TBJ4 325 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GGHQ92820 318 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GHSRQ92847 366 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TMEM80Q96HE8 168 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PGLYRP3Q96LB9 341 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 NR1H4Q96RI1 486 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LIN7BQ9HAP6 207 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TMEM138Q9NPI0 162 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 C8orf4Q9NR00 106 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 KIF25Q9UIL4 384 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ZNF281Q9Y2X9 895 aa10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 EXOSC1Q9Y3B2 195 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FBXO24O75426 580 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CDRT1O95170 752 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CD24P25063 80 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 KCNJ3P48549 501 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PRRX1P54821 245 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 RSU1Q15404 277 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LRRC36Q1X8D7 754 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PAN3Q58A45 887 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 KPRPQ5T749 579 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SAMD5Q5TGI4 173 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SATL1Q86VE3 508 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR13C5Q8NGS8 318 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR9G1Q8NH87 305 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FBLIM1Q8WUP2 373 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 STMN2Q93045 179 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CREB3L1Q96BA8 519 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ORAI1Q96D31 301 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 RBM14Q96PK6 669 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GPER1Q99527 375 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BARHL1Q9BZE3 327 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ING3Q9NXR8 418 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PLXNB1O43157 2135 aa10.92□□□□□ -0.66
TNFRSF1A-202ENST00000366159 MEIKINA0A087WXM9 373 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OOSP1A8MZH6 123 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 HSPB6O14558 160 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR2F2O95006 317 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 HTR3BO95264 441 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IL1AP01583 271 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 C21orf33P30042 268 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BRS3P32247 399 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ZNF93P35789 620 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CEACAM3P40198 252 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 RBM11P57052 281 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CD83Q01151 205 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 DOC2BQ14184 412 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BEAN1Q3B7T3 259 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TMEM95Q3KNT9 176 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms